EST details — SGN-E539753

Search information 
Request: 539753Match: SGN-E539753
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190159Clone name: TUS-59-K21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77777 [cLES-3-E13] Trace: SGN-T97524 EST: SGN-E284503 Direction: 5' Facility: TIGR
Clone: SGN-C190159 [TUS-59-K21] Trace: SGN-T340631 EST: SGN-E539756 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E539753Length: 813 bp (917 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E539753 [] (trimmed) GCTATAAAAACATGAGTATATTTATTATAATATATTTGAAGCTATCCCTTACAAATATGGAACATTGTTTTGTTCCTGAGATTATAGTACAAACT
TTGGAAGTGTGTCCTTGTACATTACATTTGGATTGAATACAACAATTACGTCTTAGCACATCATAACATAACTACAATAGCAAAAGCAGCTAATG
TTCATCGACCAGCCCAAAATATATAAATATAGATTCTTGTCATACCTTCTTGGCCAGCAACGAGAAGATGTTGTCGTTAAGTTCAGTGAGAATAT
TACATAGTACTCGCCTCTGCTCGACTACCTATTAGTGTTGGCTGCCTTCTTAAGATACTTCTTGTGAAGCTTCATAGCGCTACTGCAAGCCTTTC
TGGCATCCAAGTGTCCAGTAATATTATTCAGGATCTTAACAACTTCGTCCAGTCCTCTAGCTTCTGTTAGCTTCGCACTCTTGTCCTTCAGGACG
CTGGCTACTAGGAAAACAGAAATTGGGAGGGGAGCTTCTGTATCTTTACCTCCACTTCTCATGTTTTCTCTCTCATATTTCCCATACTGACGTAT
CGACTTAACTTTTGCTCGTCTAGAATTTTCAGCAGTCAAGTCAGGGTCTTCTTCATACATGGAAAATAACTCAGGATCATATTCCAGAGACCACA
TCATCTCCCAAAGATATAACGAATCAGAGAAAGAAAATTCTCGACGGAACATAACCATGAGCATCCGAAAAGCGACACGTAATTTCCTCCACCTA
ATGTCTCTAAGTGCTGGTGCAGTTTGGGATCNATAACTTGAGTTATTGATGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539753] SGN-U563414 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340628 [Download][View] Facility Assigned ID: TUS59K21_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0055 Quality Trim Threshold: 20.5