EST details — SGN-E539803

Search information 
Request: 539803Match: SGN-E539803
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190188Clone name: TUS-59-M2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77919 [cLES-3-L22] Trace: SGN-T97821 EST: SGN-E284800 Direction: 5' Facility: TIGR
Clone: SGN-C190188 [TUS-59-M2] Trace: SGN-T340681 EST: SGN-E539806 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E539803Length: 753 bp (871 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E539803 [] (trimmed) CATCAAAAGACATTTTCTTTTCGATTCTAATATACAAATTACATTCAGACGGGAGTATTATTGCTAAACATCTCCAAAAAAAATGCAAAAACTTA
TTAATGTTACAACAATCAACTCCTATTTCCTCGATACGAAAATGAAGTCTAAAAATTCCACTCAAAACAGAAGTTAAAGTTGTTCAGACCTCACC
AGTTGGGAGCTAAAATTGGTGAATATTTCACTTGCTCTTGACACTGACACCTTCCTTCCCAGCAATGATAACAGCAGTGGTCATATCCAAGAACA
ATCCATGCTCCACCACCCCTTCGAAAGACGCAATCTCCTTCCCAGCAGCAGCAGAATCCCTAATAGGAGTCTTGAAATACAAATCCACAATATAA
TTCGAGTTATCGGTCACATATGGCTTCCCATTACCATCCAATCTCAACTTTGCATCAACACCCTCTTCCTTAAACAATTCCTGTAACCTAACCAA
ATTGTACTTCCAACAAAACTGCACGACCTCAACCGGCATAGCCAACCCGGATCCACCAAGACCCGAAACAAGCTTCGAATCATCGACCACAACAA
CAAACTTATCAGACGCGGCCTCCACCATCTTCTCCCTTAAAAGAGCTCCTCCTCGACCCTTGACTAGGTCGAGATTCGGGTCGACCTCATCAGCA
CCATCAATAGCAAGATCAATATGTGGGTGGTCGTCAAGTGTAGAATACGGGATGTTAAGCCATGCACCTCGAGTTGATACCCATGCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539803] SGN-U570787 Tomato 200607 Build 2 51 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340678 [Download][View] Facility Assigned ID: TUS59M02_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5