EST details — SGN-E539867

Search information 
Request: 539867Match: SGN-E539867
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190224Clone name: TUS-59-N14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78288 [cLES-5-D16] Trace: SGN-T98176 EST: SGN-E285693 Direction: 5' Facility: TIGR
Clone: SGN-C190224 [TUS-59-N14] Trace: SGN-T340740 EST: SGN-E539865 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E539867Length: 815 bp (880 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E539867 [] (trimmed) CTTTGACCCTTTATGCTGTCACTACCCCTAAACCCCTTACTGTTTTTGCTGCTACTAAGAAAGCTGTTGCTGTCCTTAAGGGCAACTCTAATGTT
GAGGGGGTTGTCACTCTATCTCAAGATGATGATGGTCCAACTACGGTTAATGTTCGTATAACTGGACTTGCTCCTGGACTTCACGGGTTTCATTT
ACATGAATATGGTGACACTACAAACGGATGTATGTCTACAGGTTAGCTTCTGATTTAGTTTGAACTTTGAGTTAATCGAAATGTTGATGAATTGG
AACTCCTCTTGTAATGAGCCCATTTTAATCCGAATAAATTGACACATGGAGCTCCTGGAGATGAAATCCGTCATGCGGGTGACCTGGGAAACATA
GTGGCCAATGCCGATGGCGTGGCTGAAGTGACACTTGTAGATAATCAGATACCATTGACCGGTCCAAACTCAGTTGTTGGACGAGCACTTGTGGT
TCATGAGCTTGAGGATGACCTCGGAAAGGGTGGCCATGAACTCAGTCTTACCACTGGCAATGCTGGTGGACGATTGGCATGCGGTGTGGTTGGTT
TGACTCCAATATGAAGTAAATGCAGCAGCAACAACAGCTCTTTTGTCGGAATTATAATGAGTGAACGTATTTACCCTCCTCTCCGGGTTGCCAAT
AAACCTCTACATGAATTTGTACTGAGAAATTCTTTGATGAACTAAATTTGAACTTGTATGTACACACTTGCCAACACTTTTTTGCTTCAAAACTG
TAATTGGAGTTGGCTATTTACCTTCCTTTGTGTTTTGGCTATCTAAAGTTACACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539867] SGN-U583862 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340742 [Download][View] Facility Assigned ID: TUS59N14_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5