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EST details — SGN-E539921

Search information 
Request: 539921Match: SGN-E539921
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190255Clone name: TUS-59-O21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C79024 [cLES-7-I5] Trace: SGN-T98857 EST: SGN-E288101 Direction: 5' Facility: TIGR
Clone: SGN-C190255 [TUS-59-O21] Trace: SGN-T340793 EST: SGN-E539918 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E539921Length: 789 bp (912 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E539921 [] (trimmed) CAGATTAGTCCATCACCATGGCTTTCCAAGTAGAACCAAAACTTCCCATAATTGAGTTCACAAATGAGACCTTGAGGAGTGGCACAACCTCATGG
TTATCGACGTCTCGAGAAATCCGATGCGCGTTGGAAGAGTACGGTTGCTTTGCGGCAGTGTACAAGAAAGTCATGCCGGAGCTAAGGGAAGCCAT
GTTTGATCATTGCAAGGAGTTGTTTAAACTTCCCTTAGAAACTAAACTCAAAAATAATAGTGATATTTATGGTTTTGGTTATAGTGGGAAATTTA
GCACTATGCCTCTAGCTGAATTTTTTGGTATCGTCAATGGAGAAACTATTGATGCAACTAAGGATTTTGCTAACAAGATGTGGCCAAATGACAAC
GTTCATAAATACTGTGAAGAATCGATTTCATATTCAAAATTAATTGTTGAACTAGACGATACGATTATTCGTATGATATTGGAGTGTTATGGCAT
AGAGAAACATTATGAAGCTCTAAAAAATTCATGTATGTATTTGATGAGATTAATTAAATATCGAAGCCCAAAAAATGATGAAAAAAGTATAGGTC
ATTTACCTCATAGAGATAAATCATTTATGGGAATTATTGACACTAATCAAGTTGGAGGTTTGGAGATGCAAACAAGAGATGGCAGATGGATTACT
TTTCATCCCTCTTCTTATAAGACTCTTGTAATCATAGCTGGTGAGCCGTTCACGGCATGGAGCAATGGTAGGGTATATGCACCAATCCACAGAGT
GATTATGAAAGGAGATGGAGATAAGTATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539921] SGN-U572959 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340796 [Download][View] Facility Assigned ID: TUS59O21_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5