EST details — SGN-E540050
| Search information |
| Request: 540050 | Match: SGN-E540050 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190330 | Clone name: TUS-60-B24 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C79616 [cLES-9-I9] | Trace: SGN-T99446 | EST: SGN-E287627 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E540050 | Length: 696 bp (909 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E540050 [] (trimmed)
GAAAAATCTCAGCTAACATTAATCAATTGTATACTACAATACTACCAATATTTCTTGTTACAGCAGAGCAGCTACCAGTATCTTGCTAATTCAAA
ATCTGTAACATTATTTCTGTAAGGAATGTTTAGAGTAGCCTTTCCGTGTCATGCTAATTACAAAAATCAGATCAAGGTAAAAATTAAAAGAAAGG
TATACAAAGATAACAACAATAGGTACTCTGTAGTACATATGTGATCTACTACTGGCCGAGGCAGATGCAGTTTCATGCTCCCTCAGGCAATAGTC
ACCGACCAGTGGAGTGAGCAAAAAAGCAGCAAAAATAAGCAGAGTGACAATTGCCCTATGAAAACTCGCTTTGTGACAATCTTTATCTTGATTGT
TCATTGTTGCTGCCTTTCCTGCCTATGAACACACTCCGAAATTGTACAAATCAAGAAATAGCTATAGCAAAGAATTTGGATGTTCAATCACTAGG
ACCTTAACATTTTCCAATCTGAACTTTAGTATAGAGTGTGATCTAGTCACCAACTAATGAGATGGAAGAAGGGCAAACTCAATCTCCTGTAATGT
TTTCCCTTTCGTTTCCACCACATTCTTTTTCACAAAGGCCAGTGCAAACAAGCAAAATCCTGCAAAGATCGCATAAACTATTTGTGGTCCAAGAT
GCTCAAGCATCGGCAGAAACAGAAGGCCGAC
ATCTGTAACATTATTTCTGTAAGGAATGTTTAGAGTAGCCTTTCCGTGTCATGCTAATTACAAAAATCAGATCAAGGTAAAAATTAAAAGAAAGG
TATACAAAGATAACAACAATAGGTACTCTGTAGTACATATGTGATCTACTACTGGCCGAGGCAGATGCAGTTTCATGCTCCCTCAGGCAATAGTC
ACCGACCAGTGGAGTGAGCAAAAAAGCAGCAAAAATAAGCAGAGTGACAATTGCCCTATGAAAACTCGCTTTGTGACAATCTTTATCTTGATTGT
TCATTGTTGCTGCCTTTCCTGCCTATGAACACACTCCGAAATTGTACAAATCAAGAAATAGCTATAGCAAAGAATTTGGATGTTCAATCACTAGG
ACCTTAACATTTTCCAATCTGAACTTTAGTATAGAGTGTGATCTAGTCACCAACTAATGAGATGGAAGAAGGGCAAACTCAATCTCCTGTAATGT
TTTCCCTTTCGTTTCCACCACATTCTTTTTCACAAAGGCCAGTGCAAACAAGCAAAATCCTGCAAAGATCGCATAAACTATTTGTGGTCCAAGAT
GCTCAAGCATCGGCAGAAACAGAAGGCCGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E540050] | SGN-U572158 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T340925 [Download][View] | Facility Assigned ID: TUS60B24_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |
Working
