EST details — SGN-E540083

Search information 
Request: 540083Match: SGN-E540083
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190351Clone name: TUS-60-C21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C74560 [cLES-10-G3] Trace: SGN-T99642 EST: SGN-E285502 Direction: 5' Facility: TIGR
Clone: SGN-C190351 [TUS-60-C21] Trace: SGN-T340961 EST: SGN-E540086 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E540083Length: 503 bp (895 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E540083 [] (trimmed) AAGCAGAAAATACTTTTTCTACTTACTGAACATATCTGTTGACAGTATGAGAGCACTGATTAAGTACTACACACAAGCACACATGCACATTTAAT
TGGAAACTTCTTGAAGTTGGAGTTCAACCAAGATCGGGGACAGTAAAATACTCATCATCATCTGGGATTTCAATTCTGGACTTCTTGTAAGGCAT
TTGATATTTGGTTGTCCTGTAAATATTTGTATTGCTCGACTGAGGTACTGATAGCTCGGGCACTTCAGCTGCTGTTTGTTCACCAAAGAGATCAA
TGCCCCCTAACCACTCAAATTCACCAAGCTCAAGTAGATCCTTCTTGTCACTCGACTCATAATCTGGAAATCCTAGTAAATCATCGACAGGCCAA
GATGGTGATGTTATACAGGACAACTGCTGTGGAGGCATTTTCAAGGCTACACGGATTCCAGTGGCTAAGAAGCGTTGGTGGTTCTTAGCGAGGCT
GCTGGCTGAATGAATTGCTTCGTCACAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540083] SGN-U583624 Tomato 200607 Build 2 66 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340958 [Download][View] Facility Assigned ID: TUS60C21_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5