EST details — SGN-E540084

Search information 
Request: 540084Match: SGN-E540084
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190350Clone name: TUS-60-C20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C74549 [cLES-10-F9] Trace: SGN-T99614 EST: SGN-E285474 Direction: 5' Facility: TIGR
Clone: SGN-C190350 [TUS-60-C20] Trace: SGN-T340956 EST: SGN-E540081 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540084Length: 729 bp (894 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E540084 [] (trimmed) CTGAAATGTTGTTGCTTGCCATTAAACATGCCAATTCAGATGAGATTTTGCCTTCTAAAGAATGTGCCGACTTTAGAATGTGCCGAGCAGTCTAC
ATTTGATCTGAATATCTGATGGTATGGTGAACGAATATATGTAAGCCATCTGAGACGAATGATTTTCAAGATTTGCTGGGTATAAATAAATAGAT
ATCGTAAGTACTATGTGAATTGATGTTCCTAATGTTGAATATGAGATAACTGTAGGTTTTAAACTGAAATTACTTCTTTGTTCATCAAGGAAGGT
TTAGTATTTTGGTTATATGGAGCTGCCAGTGTTCAGCTGCTGTTGCCACCCGCGGCAATGGTGCACAAGCTAGCATGGTTGCACCCTTCACTGGA
CTCAAGTCCACTGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTGCATGCAGGT
GTGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAGCGAAATTGAGTACCTATTGA
AAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACGATGGCAGATAC
TGGACCATGTGGAAAGTTGCCCATGTTGGGTGCACTGATGCAACCCAGGTCTTGGCTGANGTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540084] SGN-U581232 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340959 [Download][View] Facility Assigned ID: TUS60C20_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5