EST details — SGN-E540214

Search information 
Request: 540214Match: SGN-E540214
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190427Clone name: TUS-60-G1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C75183 [cLES-13-C5] Trace: SGN-T100199 EST: SGN-E285886 Direction: 5' Facility: TIGR
Clone: SGN-C190427 [TUS-60-G1] Trace: SGN-T341091 EST: SGN-E540216 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540214Length: 679 bp (899 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E540214 [] (trimmed) ATAATAAGAAATATGAATGTTTTATTTATCAATGAGAGATGTGAATACAATTGGTAAAAGAGCAAACAAAGAGGGAATCCAAATATGTACACAAT
GAGCCTCCTCTACTTCCTATTGAATATGTACATGGACCTCTAACCATCTTTGATTTAAAGAAGATGGACGGATCTTACATTCTTGGGTTTTCATC
CCCAAGTCATTAATTTAACATTCATATGTAAGGATTAACATGTGATGTATAGTCACGAATGCCAGCACCTTCCCATCCCATCCACTCTTCCCATA
AATCCCAATCTGGTTCATGCATTCCTCTCATTGATTCATCATTACTATCATCATATTCCTCAATCATCTCCAGCTCTGCTCTTGTTTCACCTCTC
AAATTACTCATCACCACATCGTAAGCTTCGTTGATTTGGTGAAATTGAACACCACAATTGTTTCCTCTGCATACGTCTGGGTGATACTTAAGAGC
AAGCTGTCTAAACGCCTTCCTAACTTCAGATTCAGATGCACCGGGTTGAATCTTCAAGGTCTTATACGGATCGGCAACAGCAGAAGATGAACAAA
CACATGAAACCCCTAATCCATTTTTACCGGTTCTAGTCTTCTTCTTCGCTGAGTTCCTCAATCGAAACAGAGACGCTGAAACTGCTCCATAACCC
CAATACTTCCCGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540214] SGN-U569555 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341089 [Download][View] Facility Assigned ID: TUS60G01_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0061 Quality Trim Threshold: 14.5