EST details — SGN-E540282

Search information 
Request: 540282Match: SGN-E540282
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190467Clone name: TUS-60-H17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C75437 [cLES-14-B17] Trace: SGN-T100649 EST: SGN-E286828 Direction: 5' Facility: TIGR
Clone: SGN-C190467 [TUS-60-H17] Trace: SGN-T341160 EST: SGN-E540285 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540282Length: 748 bp (908 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E540282 [] (trimmed) AGCAAAACAACGATTATATTAATATACCCAGTGAATATTACAAGGGAGATACAAAGACAATAAAATATATACAGACCTTACCTCTACCTCGTAGA
GATAGAGAGACTGTTTCCAAAAGACAGTCGACTCAAATGCTTCTCAGTCACATAATAGAAAAGTTCCATATTACAATATTCGTCAACAATATTTT
TTCTTTCATAAGATTTTCTATTAAAAAGAAAAAGATACTTTATAGTTTCTTGCAATTGTGCATTTAACACTTCACCCTTAACCAGTACGAAGAAA
ATCTTGTTGGGAGTGTCAATGGATCCTGCAGAGTGCGACTCGGATTAAGTCGGAGCTCTAACGTGAGCTCCGGACACCGGGTGGAAAACCGAGAA
AAATATAAGCTCAGGGGGAAGCATCAGGCTGTCGTTCTGGCAAGGAAGCTTGGAATTCTGGTAATGCTTCACAAGAATCATATATTTTCCTCAAG
GTTGGAAACTCAGACATGTCAATGTCAAACCTTTTAGTAGCTACTGCAATTTGAGGTGCCAAAAACACGTCAGCCATATATACTTCATCTCCTGT
AGCATACTTTCCAGCAGAACCTGTCAGCAATTTTTCAAGAGCTCCAAAACCTTTTTGAATGTGAAATTTTGCCCATAATTGTTTCTCTTCAGGAC
CAACCCTTTCTTCCATGTACCTCAGCACTGATAACATATGAAGTGGCTGCATATTGGAGCTGACAATACTTGCCTGCAGCCCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540282] SGN-U563502 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341157 [Download][View] Facility Assigned ID: TUS60H17_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0054 Quality Trim Threshold: 12.5