EST details — SGN-E540326
Search information |
Request: 540326 | Match: SGN-E540326 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C190491 | Clone name: TUS-60-I17 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C75600 [cLES-14-L24] | Trace: SGN-T100719 | EST: SGN-E286898 | Direction: 5' | Facility: TIGR |
Clone: SGN-C190491 [TUS-60-I17] | Trace: SGN-T341198 | EST: SGN-E540323 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E540326 | Length: 833 bp (901 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E540326 [] (trimmed)
AGACAAATGAGGCTATAGCACATGCCAAGGCTGCCGGAGTTCCAATTGTGATTGCCATAAATAAGGTTGATAAGGATGGAGCAAATCCCGACCGA
GTCATGCAAGAACTTTCCACCATTGGTTTGATGCCGGAAGATTGGGGCGGCGACGTTCCAATGGTTAAGATCAGTGCTCTTAAAGGAGAGAATAT
AGATGATTTGCTGGAAATGGTCATGCTTGTTGCCGAGTTGCAAGAGTTGAAGGCTAATCCTCAAAGAAATGCCAAGGGGACTGTGATTGAGGCAG
GTCTCGATAAATCTAAAGGACCTGTAGCAACGTTCATTGTGCAGAATGGTACACTGAAAGGAGGAGATGTAGTAGTTTGTGGTGGAGCTTATGGA
AAGGTGCGGGCTCTGTTTGATGATAAGGGAAAACGTGTTGATGAAGCAGGACCCTCCATGCCTGTGCAGGTGATTGGACTGAACAATGTTCCATT
TGCTGGTGACGAGTTTGAGGTTGTTGAGTCCCTTGATATTGCTCGTGAAAAGGCTGAAGAACGAGCGGAGTCCTTGCGGAGTGAACGTTTATCGG
AAAAGGCCGGAGATGGGAAAATTACACTCTCTTCTTTTGCTTCTGCTGTTTCAGGAGGAACTGGTCTAGACTTGCACCAACTAAATATTATTCTG
AAAGTTGATCTTCAGGGATCCATTGAGGCCGTCAGACAAGCTCTTCAGGGTCTTTCACAGGATAATGTCACTTTGGAGTTCCTACTGCAAGCTAC
TGGTGATGTGAGCGCCAGTGATGTTGATCTTGCTGTAGCAAGTAAAGCTATATTTTTGGGCTTTATGTTAGGA
GTCATGCAAGAACTTTCCACCATTGGTTTGATGCCGGAAGATTGGGGCGGCGACGTTCCAATGGTTAAGATCAGTGCTCTTAAAGGAGAGAATAT
AGATGATTTGCTGGAAATGGTCATGCTTGTTGCCGAGTTGCAAGAGTTGAAGGCTAATCCTCAAAGAAATGCCAAGGGGACTGTGATTGAGGCAG
GTCTCGATAAATCTAAAGGACCTGTAGCAACGTTCATTGTGCAGAATGGTACACTGAAAGGAGGAGATGTAGTAGTTTGTGGTGGAGCTTATGGA
AAGGTGCGGGCTCTGTTTGATGATAAGGGAAAACGTGTTGATGAAGCAGGACCCTCCATGCCTGTGCAGGTGATTGGACTGAACAATGTTCCATT
TGCTGGTGACGAGTTTGAGGTTGTTGAGTCCCTTGATATTGCTCGTGAAAAGGCTGAAGAACGAGCGGAGTCCTTGCGGAGTGAACGTTTATCGG
AAAAGGCCGGAGATGGGAAAATTACACTCTCTTCTTTTGCTTCTGCTGTTTCAGGAGGAACTGGTCTAGACTTGCACCAACTAAATATTATTCTG
AAAGTTGATCTTCAGGGATCCATTGAGGCCGTCAGACAAGCTCTTCAGGGTCTTTCACAGGATAATGTCACTTTGGAGTTCCTACTGCAAGCTAC
TGGTGATGTGAGCGCCAGTGATGTTGATCTTGCTGTAGCAAGTAAAGCTATATTTTTGGGCTTTATGTTAGGA
Unigenes |
Current Unigene builds | |||||
[SGN-E540326] | SGN-U569725 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T341201 [Download][View] | Facility Assigned ID: TUS60I17_Q1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0057 | Quality Trim Threshold: 14.5 |