EST details — SGN-E540327

Search information 
Request: 540327Match: SGN-E540327
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190493Clone name: TUS-60-I19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C75654 [cLES-14-P11] Trace: SGN-T100678 EST: SGN-E286857 Direction: 5' Facility: TIGR
Clone: SGN-C190493 [TUS-60-I19] Trace: SGN-T341204 EST: SGN-E540329 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540327Length: 739 bp (854 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E540327 [] (trimmed) AGAGGTTTCAAAAGTTCTCTCTTAATGAGGGATGCATACATTGGATACCAGTAAAGCTAGCTATTCATAATCTTCTCTACATTTTTTTTTTCAAT
ACGTTAAATAAACAAAACTAAGTTATACAACGCTTATTCCTTTCTTGTCCTTCCCTATCTCCTCTATATTTACTTCTTTTTTTTTAACTCGAAAT
TTTCATTCTTCTTGTGAAATTTTTGAAAGAAACATTTCCATTGTGCCTCTTCCCCCTAATTCCCATACATTGTCATATTCTTAGTAGAAGCTAAG
AGAACGTGTACACGTACATATATTTAAAAGAAAATTTTCAAGGTCTTCAATCTTGTAGCTCTTAAGCTTGTGTAGTAGTGTTGTGTTGATCATGA
AGCCAATTTGAGAATGTTTGAAGAGTGTTCATATCAGCTCTATAATGTTTTTGAGTAAATTCAAGAAGAGTAGGCCATGTGAAATCGGGATATAT
TCGAGGGTTGTTGGAGTCCACCAATTCATTTGGTGGGCTCACCACCTTATCTTTGTTTGGACAAAGAAAGAAAGCAAGTGATTTCCTAGGAGTCT
TGTTGTTTACTACCGCTCTGTGTAGGCAACTTTTGTATCTTCCATTTGATAGCGCCATAAATGTGTCGCCTATATTAACCACAAATGCATTGAAA
TTTGGACTGATGGAACGCCATTCATCGTCCACAAAAACTTGAAGTCCACCAACACAATCTTGATGGAGAATTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540327] SGN-U583048 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341202 [Download][View] Facility Assigned ID: TUS60I19_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0015 Quality Trim Threshold: 20.5