EST details — SGN-E540570

Search information 
Request: 540570Match: SGN-E540570
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190633Clone name: TUS-60-O15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C84921 [cLET-2-L15] Trace: SGN-T102909 EST: SGN-E291368 Direction: 5' Facility: TIGR
Clone: SGN-C190633 [TUS-60-O15] Trace: SGN-T341442 EST: SGN-E540567 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540570Length: 718 bp (900 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E540570 [] (trimmed) TCAATGGCTTCTCTGCTGAACCCACCTCTCACTCTGCCTCAAAACAAGCTGAACCCTGGGGGTGTCTTATCTGTATCTACTAGTGGAATACCAAA
CAAAATTTTTCAACCATCTTCAACACGATGGAGCCACAGGCGGCGTTTGATGACGAGAGCTAAACCATCGGTGGAAATGGATATGCTGGCAAAAG
ATTCTGTAGGCACCGACGCTGTTGATGATAAGGGTGATCTTTCTTTTTCATCTCAAGCAGCACAGTCAAAATTTTCATTTGCAGATTTTGGAGTT
GTTTGCATGCACCACGTTGGGATACTATGTGAAAACCTTGAGAGGTCCTTAGACTTTTACCAGAACATTCTTGGGCTAGAAATAAATGAGGCAAG
ACCACATGACAAACTTCCCTATAGAGGTGCTTGGTTGTGGGTGGGTTCTGAGATGATACATCTAATGGAGCTTCCAAATCCAGATCCTTATACTG
GTAGGCCTGAGCACGGGGGCAGAGACCGTCATACTTGCATAGCAATTCGCGATGTGTCTAAGCTGAAAGCTATTCTTGATAAAGCTGGCATTCCC
TACACTCTTAGTCGCTCTGGGAGACCGGCCATTTTCACTCGAGACCCTGATACTAATGCACTAGAATTTACTCAAGTTGATGCTTGACAGGATCT
GGACTGCTTGCTCTCCAATTTGTAATCCTTATATATANGTAAATATACAGCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540570] SGN-U586031 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341445 [Download][View] Facility Assigned ID: TUS60O15_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0054 Quality Trim Threshold: 14.5