EST details — SGN-E540671

Search information 
Request: 540671Match: SGN-E540671
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190692Clone name: TUS-61-B2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C87666 [cLET-5-H11] Trace: SGN-T103543 EST: SGN-E290095 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E540671Length: 631 bp (884 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E540671 [] (trimmed) GAAAAGCGAGTCAGATGCAGATGATGAAGAAGCAAGGAGTGTGCAACATCATTTAGTGAGAGCATTGGAGAGGAATGGGAAACTGGTGAGCTCCC
AACTTGAAGCTCAGAATATGCAGTTTGAACAGGATAGGGAGCAAAGGAAGGACCATGTTGATAACTTAGTAGCAGTACTTACGAAGCTTGCAGAT
GCTTTGGGAAGAATTGCAGATAAGTTCTAGGGCTGTTGAGTTAATTACAATGCATATCATGTTGTCTTCATACACAAGGCTGAAGTTCAGTTTTG
GTTTGTTAATTAGTAGTTGGAGATGACATGTTCTTCTCAGGTTTTGAAGGGTTAGTGTTGGCACAAGAGGTGTACAGAAGAAATAGTAATAAATA
CAGAATTTGGAGAGGCCGGTGTCTTTGTTAATTCCTGTTTATATACACAAATATCTCTTGTTTTGTCACAATTGTCAGGCAGGTAGGAAGAATCC
TTTTGTTTATGAGCGACCTTAATTCTTATCTCACTACTTGGGGATTGCTTGCTCGGTTTGGGGGCAAATTGTATACAAATCATAATATCTCGATT
CTAGTTGTCATTGTATTACTATTATATCAGAATTCCCTTTAATCGATGGCATCTAATTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540671] SGN-U568380 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341546 [Download][View] Facility Assigned ID: TUS61B02_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0024 Quality Trim Threshold: 12.5