EST details — SGN-E540748

Search information 
Request: 540748Match: SGN-E540748
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190738Clone name: TUS-61-C24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C88231 [cLET-7-H7] Trace: SGN-T104261 EST: SGN-E292008 Direction: 5' Facility: TIGR
Clone: SGN-C190738 [TUS-61-C24] Trace: SGN-T341625 EST: SGN-E540750 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540748Length: 456 bp (972 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E540748 [] (trimmed) ATCTTGAAAGTTAGTCTTGGATTCATATATTATAGAATAGGATTAACCAAGACCAACTAGAATGTTGTACACTAAACATACATACATAACATATA
TAGTAGCACATTAAAATATTAAAATATTTCAAGTAACAATGTTCAGCTCTTTATCGCTTCGATTCGTAATTGTTTATTTTAGCAAATGACACATG
CATTAGGATTCTCTTCAATGCTATGATGGACTTGGTAATATGTGTGCATAGGAGGAGGAGGATAATAAGGTCTATATGGCATTACCATACCTATT
GGTACCATTGGCTTCTTCTCTTCTTCTTCCCTTTTTGTTTCTTCTTTCTTGTCTTCTTTTTCTCCTCCTTTTTTAGGCTCTTCTTTCTTTGTTTC
TTCTTCTTTCTTTGGTTCCTCTTTTGGTCCCACTAACATCATTTCTACTGCCCCAAACTTGCGCACCTGCAGCCCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540748] SGN-U584360 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341623 [Download][View] Facility Assigned ID: TUS61C24_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.928 Expected Error Rate: 0.0225 Quality Trim Threshold: 12.5