EST details — SGN-E540919

Search information 
Request: 540919Match: SGN-E540919
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190838Clone name: TUS-61-H4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80445 [cLET-12-E18] Trace: SGN-T105447 EST: SGN-E292984 Direction: 5' Facility: TIGR
Clone: SGN-C190838 [TUS-61-H4] Trace: SGN-T341797 EST: SGN-E540922 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540919Length: 668 bp (883 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E540919 [] (trimmed) AAGGGAACACAACAAAGTAAAATTACTACAGTTATCTCCAGAGAAAAACTTTAAGGAGGATTCAAACAAGCTTCCCCTAAATACATAGGGTCAGT
TATACATTACATAATTAAAAATTGGCATTTTAGTATCCTTCGGGCTTGTAAGCGATGAAACTGATGCACTGCACTTGACGAACATTGTCGAATCC
GATGATACGGACCCATGCCTGAGGGTAAGCCTTCTTTGCCTCCTGCACCTCAGCCAAGACCTGGGTTGCATCAGTGCACCCAAACATGGGCAACT
TCCACATGGTCCAGTATCTGCCATCGTAGTATCCTGGTGACTTATGGTTCTCACGGTACACAAATCCGTGCTCAGTCTCGAATTCCAAGCAAGGA
ACCCATCCATTTTTCAATAGGTACTCAATTTCGCTGAGCAATTGCTCGTCGGACAAATCAGGAAGGTACGACAGAGTCTCGTACTTCTTCATGTT
AATTGGTGGCCACACCTGCATGCAACTGACTCTTCCACCGTTGCTAGCAATGGAGGTAATGTCAAGGTTTTGCTTCCTTGAAACAGGGAAAGAAG
CAGTGGACTTGAGTCCAGTGAAGGGTGCAACCATGCTAGCTTGTGCACCATTGCCGCGGGTGGCAACAGCAGCTGAAGAAACTATAGAGGAACCT
GGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540919] SGN-U578438 Tomato 200607 Build 2 819 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341794 [Download][View] Facility Assigned ID: TUS61H04_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0029 Quality Trim Threshold: 12.5