EST details — SGN-E540953

Search information 
Request: 540953Match: SGN-E540953
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190856Clone name: TUS-61-H22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80794 [cLET-13-G4] Trace: SGN-T105762 EST: SGN-E293919 Direction: 5' Facility: TIGR
Clone: SGN-C190856 [TUS-61-H22] Trace: SGN-T349344 EST: SGN-E548469 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540953Length: 821 bp (891 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E540953 [] (trimmed) GGAAGTACCGCTATCCGCCTGAATAATTCGATCACAATCTGACATGACCGCACTCTTCTGGCATGATATGTTGCATGATTTTTGATGAGGCCTAA
CTAAGTTGACCTCATGCATAAGTGGACTATTCTCCTTCTCACTTGACCTGATCCTGGAAAGTGGATTCATTTGCTCGATAGCTGAACTTGAAGCA
GATGGCTTACTTGAACTAAAGAAGCACCATCACCAATTTACAGAATCCCATTTAAGCATATTTAACTTTATTAATGCTTTCTGTTGGTTAGTAGG
GCCTATCTTCTTTCATTTAAATTACTGCTGCACATGTAAAAGGACTAAGGACCACCTCAATCAGATTCATTGACAGAATCAGACTGGTTGCACCC
TTCACTGGACTCAAGTCCACTGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTG
CATGCAGGTGTGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAGCGAAATTGAGT
ACCTATTGAAAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACGAT
GGCAGATACTGGACCATGTGGAAGTTGCCCATGTTTGGGTGCACTGATGCAACCCAGGTCTTGGCTGAGGTGCAGGAGGCAAAGAAAGCTTACCC
TCAGGCATGGGTCCGTATCATCGGATTCGACAATGNTCGTCAAGTGCAGTGCATCAGTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540953] SGN-U578341 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341828 [Download][View] Facility Assigned ID: TUS61H22_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5