EST details — SGN-E541091

Search information 
Request: 541091Match: SGN-E541091
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190938Clone name: TUS-61-L8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C81908 [cLET-18-N7] Trace: SGN-T107222 EST: SGN-E293397 Direction: 5' Facility: TIGR
Clone: SGN-C190938 [TUS-61-L8] Trace: SGN-T341969 EST: SGN-E541094 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E541091Length: 698 bp (890 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E541091 [] (trimmed) ATGATAATGATGATATACCTAATCAAACAGCAATTACATATANTTCGACCATTGTATTACACAGCCATTACAAAAAGCCCTAAGGAAACACAAAA
TGCTTTCAACATGATATTCATAACCACACTGACATGAGAAGTAAAAAAAACTAGATAAAACTCCGCCTGCATCCAGGATCAACCCACAATAACAA
ATCTGCATCACTTTAAGCCTTGTTAGCAATGTTGTTAGAAAGCCAATCAAGTCCCTCATAAAGCCCCTCGCCAGAAGTTGCACAAGTGCTCTGGA
TGTACCAGTGACGCTGCCTGAGGGAGTGCAGTCCAAGCTTATCAGTTATTTCAGCAGCATTCATTGCGTTAGGAAGATCTTGTTTGTTAGCAAAT
ACTAGAAGCACAGCATCCCGAAGTTCATCCTCGTTCAACATCCTATGCAATTCATCTCTTGCTTCTACAACACGGTCTCTATCATTGCTATCAAC
CACAAAAATGAGACCCTGAGTGTTCTGGAAGTAGTGCCTCCACAATGGACGGATCTTGTCCTGACCTCCGACATCCCAAACAGTGAAGCTGATGT
TCTTGTACTCAACAGTCTCCACATTGAAACCAATGGTAGGAATAGTAGTCACGATCTCTCCCAGCTTCAACTTGTACAATATGGTGGTCTTACCA
GCTGCATCAAGACCAACCATTAGAATGCGCATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E541091] SGN-U580248 Tomato 200607 Build 2 52 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341966 [Download][View] Facility Assigned ID: TUS61L08_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0072 Quality Trim Threshold: 14.5