EST details — SGN-E541091
| Search information |
| Request: 541091 | Match: SGN-E541091 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190938 | Clone name: TUS-61-L8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C81908 [cLET-18-N7] | Trace: SGN-T107222 | EST: SGN-E293397 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190938 [TUS-61-L8] | Trace: SGN-T341969 | EST: SGN-E541094 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541091 | Length: 698 bp (890 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E541091 [] (trimmed)
ATGATAATGATGATATACCTAATCAAACAGCAATTACATATANTTCGACCATTGTATTACACAGCCATTACAAAAAGCCCTAAGGAAACACAAAA
TGCTTTCAACATGATATTCATAACCACACTGACATGAGAAGTAAAAAAAACTAGATAAAACTCCGCCTGCATCCAGGATCAACCCACAATAACAA
ATCTGCATCACTTTAAGCCTTGTTAGCAATGTTGTTAGAAAGCCAATCAAGTCCCTCATAAAGCCCCTCGCCAGAAGTTGCACAAGTGCTCTGGA
TGTACCAGTGACGCTGCCTGAGGGAGTGCAGTCCAAGCTTATCAGTTATTTCAGCAGCATTCATTGCGTTAGGAAGATCTTGTTTGTTAGCAAAT
ACTAGAAGCACAGCATCCCGAAGTTCATCCTCGTTCAACATCCTATGCAATTCATCTCTTGCTTCTACAACACGGTCTCTATCATTGCTATCAAC
CACAAAAATGAGACCCTGAGTGTTCTGGAAGTAGTGCCTCCACAATGGACGGATCTTGTCCTGACCTCCGACATCCCAAACAGTGAAGCTGATGT
TCTTGTACTCAACAGTCTCCACATTGAAACCAATGGTAGGAATAGTAGTCACGATCTCTCCCAGCTTCAACTTGTACAATATGGTGGTCTTACCA
GCTGCATCAAGACCAACCATTAGAATGCGCATT
TGCTTTCAACATGATATTCATAACCACACTGACATGAGAAGTAAAAAAAACTAGATAAAACTCCGCCTGCATCCAGGATCAACCCACAATAACAA
ATCTGCATCACTTTAAGCCTTGTTAGCAATGTTGTTAGAAAGCCAATCAAGTCCCTCATAAAGCCCCTCGCCAGAAGTTGCACAAGTGCTCTGGA
TGTACCAGTGACGCTGCCTGAGGGAGTGCAGTCCAAGCTTATCAGTTATTTCAGCAGCATTCATTGCGTTAGGAAGATCTTGTTTGTTAGCAAAT
ACTAGAAGCACAGCATCCCGAAGTTCATCCTCGTTCAACATCCTATGCAATTCATCTCTTGCTTCTACAACACGGTCTCTATCATTGCTATCAAC
CACAAAAATGAGACCCTGAGTGTTCTGGAAGTAGTGCCTCCACAATGGACGGATCTTGTCCTGACCTCCGACATCCCAAACAGTGAAGCTGATGT
TCTTGTACTCAACAGTCTCCACATTGAAACCAATGGTAGGAATAGTAGTCACGATCTCTCCCAGCTTCAACTTGTACAATATGGTGGTCTTACCA
GCTGCATCAAGACCAACCATTAGAATGCGCATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541091] | SGN-U580248 | Tomato 200607 | Build 2 | 52 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T341966 [Download][View] | Facility Assigned ID: TUS61L08_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0072 | Quality Trim Threshold: 14.5 |
Working
