EST details — SGN-E541152
| Search information |
| Request: 541152 | Match: SGN-E541152 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C190972 | Clone name: TUS-61-M18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82708 [cLET-20-P4] | Trace: SGN-T107757 | EST: SGN-E295343 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C190972 [TUS-61-M18] | Trace: SGN-T342025 | EST: SGN-E541150 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541152 | Length: 800 bp (898 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E541152 [] (trimmed)
CGAAATCCTCCGTTTGATTTTAGGGCTTTGTTGAGAATGGTGGAAAAGTCGACTCGAATAGCAAGCAGGAAAAGACCGAAAATGGATCCTTTGTC
TGTTTATGAATTCACTGATGATGATTTATCAGTAGAAGTTACTTCTGACTCTGTCGATTCCAAGTTGAATTCAACCTCTAAATCTGCTCCGATAA
ACTCCAGCGGAAGAAGGACTCGATCTCAGATGACTCCCGATGGAGCAATTGTGGGTACTGAATCTAATGCGATGAAGTCCCCTAGAACGAAAGGT
GAATTTTCTGGAAAAAGGAAGGATGTTAATGCTGCTGGGAAAAATAAGGGTAAATCTGTACAGCGGGATGAAGTTGTTACATCAAAAAAGAGAAA
GGTGTATGATGGACTATACGAAGAAGAGCATCCAAGCTCCTCCAATTTGAAGACTTGGGATTTCTACATCCCACCAAACAAACATTTCCACACAC
GTGTAAGTTCGCACACAAATTGTAATGCTGTTACATTGTTGAAAAGCAAGTTGGATGATAGACAGCTCCAAATCTTCAGGGGAACCACATTCGGA
TACTTTCTAGATTTGCCTCATGTAGTTGTACAGAATCAGCTTATACATGCCCTATTGCTCAGGCAGGTGGTCCCGGAAAGAGAGGATGAATTGTG
GTTTAAAGTGAACGGGACCAAGTTGCGTTTCAGTCTGGCAGAATTGGGGATTATTACTGGCTTGCGATGTTGTGGTGATGCTGATAAGGGTTATG
AATCTAGTGATACCAATANGTTGATGGATATGTACTTTCC
TGTTTATGAATTCACTGATGATGATTTATCAGTAGAAGTTACTTCTGACTCTGTCGATTCCAAGTTGAATTCAACCTCTAAATCTGCTCCGATAA
ACTCCAGCGGAAGAAGGACTCGATCTCAGATGACTCCCGATGGAGCAATTGTGGGTACTGAATCTAATGCGATGAAGTCCCCTAGAACGAAAGGT
GAATTTTCTGGAAAAAGGAAGGATGTTAATGCTGCTGGGAAAAATAAGGGTAAATCTGTACAGCGGGATGAAGTTGTTACATCAAAAAAGAGAAA
GGTGTATGATGGACTATACGAAGAAGAGCATCCAAGCTCCTCCAATTTGAAGACTTGGGATTTCTACATCCCACCAAACAAACATTTCCACACAC
GTGTAAGTTCGCACACAAATTGTAATGCTGTTACATTGTTGAAAAGCAAGTTGGATGATAGACAGCTCCAAATCTTCAGGGGAACCACATTCGGA
TACTTTCTAGATTTGCCTCATGTAGTTGTACAGAATCAGCTTATACATGCCCTATTGCTCAGGCAGGTGGTCCCGGAAAGAGAGGATGAATTGTG
GTTTAAAGTGAACGGGACCAAGTTGCGTTTCAGTCTGGCAGAATTGGGGATTATTACTGGCTTGCGATGTTGTGGTGATGCTGATAAGGGTTATG
AATCTAGTGATACCAATANGTTGATGGATATGTACTTTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541152] | SGN-U575395 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342027 [Download][View] | Facility Assigned ID: TUS61M18_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
