EST details — SGN-E541202

Search information 
Request: 541202Match: SGN-E541202
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191001Clone name: TUS-61-N23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83044 [cLET-23-B20] Trace: SGN-T108149 EST: SGN-E295424 Direction: 5' Facility: TIGR
Clone: SGN-C191001 [TUS-61-N23] Trace: SGN-T342074 EST: SGN-E541199 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E541202Length: 787 bp (916 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E541202 [] (trimmed) TCACAACCAAAAAAAAAAAAAAAAAATTCTTTTGAATTTTTTTTAACAACCCCATTTTCTAATTTGTGATGATTTGAAGTTTTTCTTAGTTAATT
TTTGAAAAAAAATTGAATCTTGATTTTTGTTTTTTTAATTTTAAGAATTTGGGGTTTCCAAAAAATGGAGCCTGCAAATTTGGGTAATTTGAGAG
GTAGTAGTTTAAGAGGAAGTATAAGTGGAAGTAGAAGAGGAAGTGTAAGCTTAAGAGCAAATAGTAATTCCATATGGAGAAATACTGGGGTTGAG
ATATTTTCAAGATCAGCTAGAGATGAAGATGATGAAGAAGCATTAAAATGGGCAGCACTTGAAAAATTACCAACTTTTGATAGATTAAGAAAAGG
TTTATTGTTTGGTTCACAAGGTGCTGCTGCTGAAATTGATATTGATGATATTGGTTTACAAGAAAGAAAAAATTTACTTGAAAGACTTGTTAGAG
TTGCTGATGAAGATAATGAAAAGTTCTTGTTGAAACTCAAAAACAGGATTGATAGGTATGTTCATCTTTGTTTGATTCAAATCTCGCGTTCGAAT
CCTGAATATTAAATACTTGTACTATTTTCTTCCGACCCCACTTTGTGAAACTACACTGAACTTGTAGTTGTTGTTGGGTGGGAAGTTAAATTTTG
TTTTTTTTTAATGGTTACCATAGATGTTGTCTACGATTCATATTGAATCCGACTTATTTGGGATCACATAGTATAAGTCGGAAATGTCTTTATAT
AAGGATTTTTTTTTTATAATCAGAGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E541202] SGN-U583818 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T342077 [Download][View] Facility Assigned ID: TUS61N23_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.905 Expected Error Rate: 0.0108 Quality Trim Threshold: 12.5