EST details — SGN-E541224
| Search information |
| Request: 541224 | Match: SGN-E541224 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191015 | Clone name: TUS-61-O13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83276 [cLET-23-P3] | Trace: SGN-T108287 | EST: SGN-E295562 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E541224 | Length: 702 bp (863 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E541224 [] (trimmed)
ACATAATCAAAAAAAATAATTAACAAATCCAATTGCCAAATATTTACACCCATAGTTTATTCCTTTCTCCTCCTTCCTATTTTTCATGATTTTTT
TTTCTAATATGTACCAAAACTCCAACTATACAATAACATACATAAATTTTAAAAAATAAATTAAACACTTTTATTCTCAAAATATCTTTCAACTC
AACCCGATCCATATAACTCCCCTTGACTTGACTCTCAAAGTCAAAGTCAAAATTATTCTGCTACGCAACGGCGCACGTTAGTGTTGGTTCAAGTT
ATCCCACAAAGATGCGCACTTCCTTTTGGCAAATCCAACTCTTTTCTTTTCTAAATCATAAACAACTTCAAATCCTTGTTGAAAATAATTTCCTA
ATATCCCTGCGGGCCCACTTTCCCCTTCATCACCACCGTTCATCAACATCACACATCCTACTTTTCTTTTCACTTTCTCATCATCAACGAACTCA
TAAAAATAGTTTCTCCTGGGCATCACCACACTGGAATTTCCCCCAAAATGTAGTAACAGCTGCGGCACATTTTTTGAACCGGAGTCCATATAGTA
ACACGGGTGAAGACCGGTTTTTTCCTCGACCGGGTTTGCTCTTTTCAAAACCGGTCCAACTCTCCGGTCGAATTCAGTCACCACTGTTTCATAGA
ACTTCAAAGGTAACATAGTGAAAGTTGTACCNGAATC
TTTCTAATATGTACCAAAACTCCAACTATACAATAACATACATAAATTTTAAAAAATAAATTAAACACTTTTATTCTCAAAATATCTTTCAACTC
AACCCGATCCATATAACTCCCCTTGACTTGACTCTCAAAGTCAAAGTCAAAATTATTCTGCTACGCAACGGCGCACGTTAGTGTTGGTTCAAGTT
ATCCCACAAAGATGCGCACTTCCTTTTGGCAAATCCAACTCTTTTCTTTTCTAAATCATAAACAACTTCAAATCCTTGTTGAAAATAATTTCCTA
ATATCCCTGCGGGCCCACTTTCCCCTTCATCACCACCGTTCATCAACATCACACATCCTACTTTTCTTTTCACTTTCTCATCATCAACGAACTCA
TAAAAATAGTTTCTCCTGGGCATCACCACACTGGAATTTCCCCCAAAATGTAGTAACAGCTGCGGCACATTTTTTGAACCGGAGTCCATATAGTA
ACACGGGTGAAGACCGGTTTTTTCCTCGACCGGGTTTGCTCTTTTCAAAACCGGTCCAACTCTCCGGTCGAATTCAGTCACCACTGTTTCATAGA
ACTTCAAAGGTAACATAGTGAAAGTTGTACCNGAATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541224] | SGN-U568241 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342099 [Download][View] | Facility Assigned ID: TUS61O13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.922 | Expected Error Rate: 0.0015 | Quality Trim Threshold: 20.5 |
Working
