EST details — SGN-E541224
Search information |
Request: 541224 | Match: SGN-E541224 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C191015 | Clone name: TUS-61-O13 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C83276 [cLET-23-P3] | Trace: SGN-T108287 | EST: SGN-E295562 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E541224 | Length: 702 bp (863 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E541224 [] (trimmed)
ACATAATCAAAAAAAATAATTAACAAATCCAATTGCCAAATATTTACACCCATAGTTTATTCCTTTCTCCTCCTTCCTATTTTTCATGATTTTTT
TTTCTAATATGTACCAAAACTCCAACTATACAATAACATACATAAATTTTAAAAAATAAATTAAACACTTTTATTCTCAAAATATCTTTCAACTC
AACCCGATCCATATAACTCCCCTTGACTTGACTCTCAAAGTCAAAGTCAAAATTATTCTGCTACGCAACGGCGCACGTTAGTGTTGGTTCAAGTT
ATCCCACAAAGATGCGCACTTCCTTTTGGCAAATCCAACTCTTTTCTTTTCTAAATCATAAACAACTTCAAATCCTTGTTGAAAATAATTTCCTA
ATATCCCTGCGGGCCCACTTTCCCCTTCATCACCACCGTTCATCAACATCACACATCCTACTTTTCTTTTCACTTTCTCATCATCAACGAACTCA
TAAAAATAGTTTCTCCTGGGCATCACCACACTGGAATTTCCCCCAAAATGTAGTAACAGCTGCGGCACATTTTTTGAACCGGAGTCCATATAGTA
ACACGGGTGAAGACCGGTTTTTTCCTCGACCGGGTTTGCTCTTTTCAAAACCGGTCCAACTCTCCGGTCGAATTCAGTCACCACTGTTTCATAGA
ACTTCAAAGGTAACATAGTGAAAGTTGTACCNGAATC
TTTCTAATATGTACCAAAACTCCAACTATACAATAACATACATAAATTTTAAAAAATAAATTAAACACTTTTATTCTCAAAATATCTTTCAACTC
AACCCGATCCATATAACTCCCCTTGACTTGACTCTCAAAGTCAAAGTCAAAATTATTCTGCTACGCAACGGCGCACGTTAGTGTTGGTTCAAGTT
ATCCCACAAAGATGCGCACTTCCTTTTGGCAAATCCAACTCTTTTCTTTTCTAAATCATAAACAACTTCAAATCCTTGTTGAAAATAATTTCCTA
ATATCCCTGCGGGCCCACTTTCCCCTTCATCACCACCGTTCATCAACATCACACATCCTACTTTTCTTTTCACTTTCTCATCATCAACGAACTCA
TAAAAATAGTTTCTCCTGGGCATCACCACACTGGAATTTCCCCCAAAATGTAGTAACAGCTGCGGCACATTTTTTGAACCGGAGTCCATATAGTA
ACACGGGTGAAGACCGGTTTTTTCCTCGACCGGGTTTGCTCTTTTCAAAACCGGTCCAACTCTCCGGTCGAATTCAGTCACCACTGTTTCATAGA
ACTTCAAAGGTAACATAGTGAAAGTTGTACCNGAATC
Unigenes |
Current Unigene builds | |||||
[SGN-E541224] | SGN-U568241 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T342099 [Download][View] | Facility Assigned ID: TUS61O13_P1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.922 | Expected Error Rate: 0.0015 | Quality Trim Threshold: 20.5 |