EST details — SGN-E541228
Search information |
Request: 541228 | Match: SGN-E541228 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C191016 | Clone name: TUS-61-O14 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C83265 [cLET-23-P15] | Trace: SGN-T108145 | EST: SGN-E295420 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E541228 | Length: 762 bp (885 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E541228 [] (trimmed)
GTAAAAAAAAATGGCTCAATTGTTGTCACCTGTTTGTACAGATTCACTAAAATTACAGAACACAGTTCAGTGTTTCTATACAAGAAGTAAAGTTC
CAATTTTGGGTAATAATTTTAGCTCAATGGGTGTTTTTGGAAAGAAGAGAGGAGGATTAGGGAGGATTAAAGTTGCTTATCAAGATTCTGCTGCT
GCATCTGAGGAAATTGCTGATGATTTTTATGCTGTTTTGGGTTTGCTTCCTGATGCTACACCTGCTCAAATAAAGAAGGCATACTATAGTTGCAT
GAAAGCTTGCCATCCAGATTTGAGTGGTGATGATCCCGAGACCACAAATTTTTGCATGTTTATCAATGAGGTCTATGAGATTCTTAGTGATCCAG
TGCAAAGGAGAGTTTATGATGAGATCCATGGGTACACAGCCACAGCAATTAACCCTTTCCTGAGCGATTCATCGCCGAAAGATCATGTATTTGTT
GACGAGTTTAGCTGCATAGGCTGCAAAAATTGTGCCAATGTTTGCTCAAAAGTGTTTGGGATTGAGGAAGACTTTGGAAGAGCTAGAGTTTACGA
TCAATGTGGACACCCTGATTTAATTCAACAAGCTATAGATAGCTGCCCAGTGGATTGCATACATTGGACTTCTGCTGCACAGCTGTCTTTGCTTG
AGGATGAAATGCGAAGAATAGAAAGAGTAAACGTTGCCTTGATGCTATCANGAATGGGCAGTGGAGCCATGGATGTATTCAGAATGGCGAGCACG
CG
CAATTTTGGGTAATAATTTTAGCTCAATGGGTGTTTTTGGAAAGAAGAGAGGAGGATTAGGGAGGATTAAAGTTGCTTATCAAGATTCTGCTGCT
GCATCTGAGGAAATTGCTGATGATTTTTATGCTGTTTTGGGTTTGCTTCCTGATGCTACACCTGCTCAAATAAAGAAGGCATACTATAGTTGCAT
GAAAGCTTGCCATCCAGATTTGAGTGGTGATGATCCCGAGACCACAAATTTTTGCATGTTTATCAATGAGGTCTATGAGATTCTTAGTGATCCAG
TGCAAAGGAGAGTTTATGATGAGATCCATGGGTACACAGCCACAGCAATTAACCCTTTCCTGAGCGATTCATCGCCGAAAGATCATGTATTTGTT
GACGAGTTTAGCTGCATAGGCTGCAAAAATTGTGCCAATGTTTGCTCAAAAGTGTTTGGGATTGAGGAAGACTTTGGAAGAGCTAGAGTTTACGA
TCAATGTGGACACCCTGATTTAATTCAACAAGCTATAGATAGCTGCCCAGTGGATTGCATACATTGGACTTCTGCTGCACAGCTGTCTTTGCTTG
AGGATGAAATGCGAAGAATAGAAAGAGTAAACGTTGCCTTGATGCTATCANGAATGGGCAGTGGAGCCATGGATGTATTCAGAATGGCGAGCACG
CG
Unigenes |
Current Unigene builds | |||||
[SGN-E541228] | SGN-U566991 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T342103 [Download][View] | Facility Assigned ID: TUS61O14_Q1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.967 | Expected Error Rate: 0.0082 | Quality Trim Threshold: 14.5 |