EST details — SGN-E541228
| Search information |
| Request: 541228 | Match: SGN-E541228 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191016 | Clone name: TUS-61-O14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83265 [cLET-23-P15] | Trace: SGN-T108145 | EST: SGN-E295420 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E541228 | Length: 762 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E541228 [] (trimmed)
GTAAAAAAAAATGGCTCAATTGTTGTCACCTGTTTGTACAGATTCACTAAAATTACAGAACACAGTTCAGTGTTTCTATACAAGAAGTAAAGTTC
CAATTTTGGGTAATAATTTTAGCTCAATGGGTGTTTTTGGAAAGAAGAGAGGAGGATTAGGGAGGATTAAAGTTGCTTATCAAGATTCTGCTGCT
GCATCTGAGGAAATTGCTGATGATTTTTATGCTGTTTTGGGTTTGCTTCCTGATGCTACACCTGCTCAAATAAAGAAGGCATACTATAGTTGCAT
GAAAGCTTGCCATCCAGATTTGAGTGGTGATGATCCCGAGACCACAAATTTTTGCATGTTTATCAATGAGGTCTATGAGATTCTTAGTGATCCAG
TGCAAAGGAGAGTTTATGATGAGATCCATGGGTACACAGCCACAGCAATTAACCCTTTCCTGAGCGATTCATCGCCGAAAGATCATGTATTTGTT
GACGAGTTTAGCTGCATAGGCTGCAAAAATTGTGCCAATGTTTGCTCAAAAGTGTTTGGGATTGAGGAAGACTTTGGAAGAGCTAGAGTTTACGA
TCAATGTGGACACCCTGATTTAATTCAACAAGCTATAGATAGCTGCCCAGTGGATTGCATACATTGGACTTCTGCTGCACAGCTGTCTTTGCTTG
AGGATGAAATGCGAAGAATAGAAAGAGTAAACGTTGCCTTGATGCTATCANGAATGGGCAGTGGAGCCATGGATGTATTCAGAATGGCGAGCACG
CG
CAATTTTGGGTAATAATTTTAGCTCAATGGGTGTTTTTGGAAAGAAGAGAGGAGGATTAGGGAGGATTAAAGTTGCTTATCAAGATTCTGCTGCT
GCATCTGAGGAAATTGCTGATGATTTTTATGCTGTTTTGGGTTTGCTTCCTGATGCTACACCTGCTCAAATAAAGAAGGCATACTATAGTTGCAT
GAAAGCTTGCCATCCAGATTTGAGTGGTGATGATCCCGAGACCACAAATTTTTGCATGTTTATCAATGAGGTCTATGAGATTCTTAGTGATCCAG
TGCAAAGGAGAGTTTATGATGAGATCCATGGGTACACAGCCACAGCAATTAACCCTTTCCTGAGCGATTCATCGCCGAAAGATCATGTATTTGTT
GACGAGTTTAGCTGCATAGGCTGCAAAAATTGTGCCAATGTTTGCTCAAAAGTGTTTGGGATTGAGGAAGACTTTGGAAGAGCTAGAGTTTACGA
TCAATGTGGACACCCTGATTTAATTCAACAAGCTATAGATAGCTGCCCAGTGGATTGCATACATTGGACTTCTGCTGCACAGCTGTCTTTGCTTG
AGGATGAAATGCGAAGAATAGAAAGAGTAAACGTTGCCTTGATGCTATCANGAATGGGCAGTGGAGCCATGGATGTATTCAGAATGGCGAGCACG
CG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541228] | SGN-U566991 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342103 [Download][View] | Facility Assigned ID: TUS61O14_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0082 | Quality Trim Threshold: 14.5 |
Working
