EST details — SGN-E541239

Search information 
Request: 541239Match: SGN-E541239
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191024Clone name: TUS-61-O22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83320 [cLET-24-D12] Trace: SGN-T108665 EST: SGN-E296148 Direction: 5' Facility: TIGR
Clone: SGN-C191024 [TUS-61-O22] Trace: SGN-T342117 EST: SGN-E541242 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E541239Length: 746 bp (938 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E541239 [] (trimmed) AACAGAAATAAGTTAACCATCTACTTCATTTCACCATTTTATATTAATACATAGTAGTTTTCAAAAGCATTAAAAAAACATTTTTTTTAGATATA
CATTTTACAAACATATTTGGTAAAAAAAAAAAACTTATTTTCTCAAATTTAAAAAGTATTTTTTTTTTTTACAAATTAAACATGACTTTAATAGC
ATCACCACCACGAGCACTTGTTTCAAAAGCTTCTTCAACTTCTTCTTGAGAGAATCCAAACCTGTGTGTGATCAAAGGTTTCACATCAATCTTAC
CACTTCTTAAGAACTCAAGACACAATGGCCATGTATTCTTGTAGCGAAATATGCCGATGACGTCGACCTCCCTTGCAGCAGCTGGAGTGAGAGGA
ACGGTCATCTCATGATGTCCCATTCCAACCAAGCAAACTTTGCCACCTGGACGAGTTGCACCAAGAGCGGTCGACATAGTTTTGTTAAAGCCAGC
ACAGTCAAAACTCGCGTCGATTCCACCTCCCATTGCTTTCTGAATGTTTTCTATATCTGTAGCTACATCCTGAATATTGATTGAAACCTTGACGA
TGTCATCTGCTCCTAACTTCTTTGCAACAGAAAGACGATAGTCATCTACATCCACAATAACAATTCTTGGGGCACCAAAAGCACGAGCAGCAAGC
AGCGTGACAAGCCCAATTGGTCCAGCTCCCAGCACTAATATGTTTGTCTCAGGACCAACATTTGCACGCCGACAGGCATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E541239] SGN-U579974 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T342114 [Download][View] Facility Assigned ID: TUS61O22_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5