EST details — SGN-E541274
| Search information |
| Request: 541274 | Match: SGN-E541274 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191043 | Clone name: TUS-61-P17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83522 [cLET-25-B1] | Trace: SGN-T108518 | EST: SGN-E295793 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191043 [TUS-61-P17] | Trace: SGN-T342147 | EST: SGN-E541272 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541274 | Length: 571 bp (914 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E541274 [] (trimmed)
GTTCGGGGCTACCTAGGTTTGAAGAGGTGATTCCTGGAGTGTGTTTTGGAGCTCGGAACAGTTTGGAACAAGCATCTGCATTGGTAAACAAAGGG
GTGCTTAAATCTCATGATTTCAGATTCTTTGTTGGCTATGCGGGGTGGCAGCTTGACCAGTTGAGGGAAGAGATTGAATCTGGCTATTGGTATGT
TGCCTCTTGTAGTGCAAATCTGATTTTTGCAGGTTCGCAAACTTCGTCATCAGAGAGTTTGTGGGTAGAAATATTACAGCTGATGGGTGGTCAGT
ATTCTGAATTAAGTCGGAAGCCTAAGCAAGACATATAACTTCTCAATGGTCACTTTACTGTCAAAACCGAGCATATTCAGTTTGTGTGAAGGCAA
ATGTACATAATGGTGGCACAGGTCCCTAATCTAGTAGAGTTATCGTTTTCCCATTTCTGCATCTCTCTTAGACCTTTGTAATAAGTTAGTATATG
ATAAATTTATGTAAAAGATAATCTTTGGAGGGTCCTAGTATTATTAATTTAACCTGACTATAACTGCTTGTAATAATAAACAAAGACACTTGCCA
C
GTGCTTAAATCTCATGATTTCAGATTCTTTGTTGGCTATGCGGGGTGGCAGCTTGACCAGTTGAGGGAAGAGATTGAATCTGGCTATTGGTATGT
TGCCTCTTGTAGTGCAAATCTGATTTTTGCAGGTTCGCAAACTTCGTCATCAGAGAGTTTGTGGGTAGAAATATTACAGCTGATGGGTGGTCAGT
ATTCTGAATTAAGTCGGAAGCCTAAGCAAGACATATAACTTCTCAATGGTCACTTTACTGTCAAAACCGAGCATATTCAGTTTGTGTGAAGGCAA
ATGTACATAATGGTGGCACAGGTCCCTAATCTAGTAGAGTTATCGTTTTCCCATTTCTGCATCTCTCTTAGACCTTTGTAATAAGTTAGTATATG
ATAAATTTATGTAAAAGATAATCTTTGGAGGGTCCTAGTATTATTAATTTAACCTGACTATAACTGCTTGTAATAATAAACAAAGACACTTGCCA
C
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541274] | SGN-U580758 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342149 [Download][View] | Facility Assigned ID: TUS61P17_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0001 | Quality Trim Threshold: 12.5 |
Working
