EST details — SGN-E541376

Search information 
Request: 541376Match: SGN-E541376
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191102Clone name: TUS-62-C4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C84242 [cLET-28-B18] Trace: SGN-T109320 EST: SGN-E297526 Direction: 5' Facility: TIGR
Clone: SGN-C191102 [TUS-62-C4] Trace: SGN-T342248 EST: SGN-E541373 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E541376Length: 568 bp (887 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E541376 [] (trimmed) GAAAATATAAGATGAATAAGAAAGGAGGCAGCACTAACTCCTCCAGTATTTGTTAAACCTTCCAGATTGTAGCATGGAGGGGGAGAATTATAATC
TTCACTGGCCCTACCCAATTTGTAGTCAAGGTTTTTCTAGATTCAGGAGCTAAAGCTGTTGCATGTCCTTCCATTGAGCCCGATGAAGCGCGGTT
GTTTACATTTCAAGAGTCGGGTGATTTTAACTCTTTCAATAATGGAAAGTTTGTAATTGGCGAAAAAGAAATAGAAGATGACGACACTGAACCTT
CTAGAGTCCAGCCAGTGCTTGGGAAGATAGTTTACCAGAGAAAAGTGAAGGACACTCTCAGTTCTTTTGGGATGAATATGATGATCAAGGGGAGT
TATCCCAGTTCATATGTCAGTTTTATGAGTCTCGTTATCAAATTGGTTCGAGAATAGATGATGCATTACAACATGCTCGAAGATATTCATGCCAT
CTTCCCAGCATACCGTAGTTAGGTGGTTATCTCTGACCATGATAGTCCCCAGGGAAAGCGCGAGTTTGTTAATGCTTATGCTGACTGCATGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E541376] SGN-U566880 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T342251 [Download][View] Facility Assigned ID: TUS62C04_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0083 Quality Trim Threshold: 14.5