EST details — SGN-E541525

Search information 
Request: 541525Match: SGN-E541525
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191189Clone name: TUS-62-F19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C85449 [cLET-39-K13] Trace: SGN-T110115 EST: SGN-E296589 Direction: 5' Facility: TIGR
Clone: SGN-C191189 [TUS-62-F19] Trace: SGN-T349438 EST: SGN-E548563 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E541525Length: 764 bp (906 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E541525 [] (trimmed) CTTTTGTGGTTTTTTTCCTTTTCTTCATTCATGGGGTTGTTCTTAGCTTAGCAGACAAGCACTTAAAAAAAGAACAAATTTTTAATTTTTATTTT
TTCAACTTTTGACATTTCTTGATAAATTGGCTTTGAATTTTTCATTATGAGTAGTAAAGAGTTGTTGAGAATGAAAACTAAAAAGGCAAATGGGA
ATGGAGTTTCATCATCAGGATGGGAAATGAGGCCAGGAGGAATGTTAGTACAAAAGAGAAGTTCTGATCATAATTCAAATCAAAGTTCAAATATT
GTTGTTCCAATTATTAGACTCAAAGTTAAATATGGTTCATCTTATCATGAAGTCAAAATTAGCTCACAAGCAACTTTTGGGGAGTTGAAGAAAAT
GTTGGCAGGGCCAACTGGATTACATACTGAAGATCAGAAAATATTTTACAAGGAAAAAGAAAAAGATTCTAGAAATTTTCTTGATGTTTCTGGTA
TAAAAGATGGATCAAAGCTTGTACTAATTGAAGATGAAATAAGCAGAGAAAAAAGGTATCTTGAATCAAGAAGAAATGCAAAAATGGAAAATGCA
TCAAAAGAAATCACATCAATTAGACTTGAAATTGATAAACTAGCTAAACAGGTTGCAAATGTTGAAATGGACATTTATGGTGGCAAAAAAGTAAC
AGAGACTTTGTTATTGAGTTTGATTGAAATGTTAATGACACAATTGATTAAGTTGGNATGGATTACTGCTGATGGTGATCTTAAATTACAGAGAA
GAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E541525] SGN-U566191 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T342400 [Download][View] Facility Assigned ID: TUS62F19_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.912 Expected Error Rate: 0.0042 Quality Trim Threshold: 14.5