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EST details — SGN-E541968

Search information 
Request: 541968Match: SGN-E541968
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191447Clone name: TUS-63-A13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
See unigene SGN-U576274 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C91845 [cLEW-8-K6] Trace: SGN-T112427 EST: SGN-E300822 Direction: 5' Facility: TIGR
Clone: SGN-C191447 [TUS-63-A13] Trace: SGN-T342841 EST: SGN-E541966 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E541968Length: 746 bp (865 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E541968 [] (trimmed) GGAAAGGTGGAGCTGGTGTTGTGTACCGAGGGTCTATGTCAAATGGCATCGACGTTGCAATAAAGAAACTTGTAGGCCGAGGAACCGGACACCAT
GATCACGGATTCTCAGCTGAAATCCAAACACTAGGAAGGATCCGGCACAGAAACATCGTACGATTACTGGGATATGTCTCAAACAAAGACACAAA
CTTGTTGTTGTACGAATACATGTCAAATGGGAGCTTAGGTGAAATGTTACATGGTGCCAAAGGGGCACATTTGAAATGGGAGACAAGGTACCGTA
TTGCTGTGGAAGCTGCAAAAGGATTGTGTTATTTGCACCATGATTGTTCACCTTCGATTATTCACAGAGATGTCAAGTCCAATAATATTCTGCTG
GATTCCGATTACGAAGCGCATGTTGCTGATTTCGGCCTCGCCAAATTCTTGCAGGATGCTGGTGCATCAGAGTGCATGTCCTCTATTGCTGGCTC
ATATGGTTACATTGCTCCAGAGTATGCATACACATTGAAAGTTGACCAAAAGAGTGATGTATACAGTTTTGGAGTTGTACTGTTGGAACTTATCA
CAGGTCACAAGCCAGTAGGTGAATTCGGGGACGGTGTAGATATAGTGAGATGGGTGAATAAAACAATGTCCGAATTATCTCAACCGTCTGATGCA
GCCTCAGTTTTAGCAGGCGTTGACTCGAGGCTACATAGTTACCCTCTTGCAAGTGTTGTCAATTTGGTCAAGATTGCTATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E541968] SGN-U576274 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T342843 [Download][View] Facility Assigned ID: TUS63A13_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5