EST details — SGN-E541968
| Search information |
| Request: 541968 | Match: SGN-E541968 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191447 | Clone name: TUS-63-A13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
See unigene SGN-U576274 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C91845 [cLEW-8-K6] | Trace: SGN-T112427 | EST: SGN-E300822 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191447 [TUS-63-A13] | Trace: SGN-T342841 | EST: SGN-E541966 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541968 | Length: 746 bp (865 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E541968 [] (trimmed)
GGAAAGGTGGAGCTGGTGTTGTGTACCGAGGGTCTATGTCAAATGGCATCGACGTTGCAATAAAGAAACTTGTAGGCCGAGGAACCGGACACCAT
GATCACGGATTCTCAGCTGAAATCCAAACACTAGGAAGGATCCGGCACAGAAACATCGTACGATTACTGGGATATGTCTCAAACAAAGACACAAA
CTTGTTGTTGTACGAATACATGTCAAATGGGAGCTTAGGTGAAATGTTACATGGTGCCAAAGGGGCACATTTGAAATGGGAGACAAGGTACCGTA
TTGCTGTGGAAGCTGCAAAAGGATTGTGTTATTTGCACCATGATTGTTCACCTTCGATTATTCACAGAGATGTCAAGTCCAATAATATTCTGCTG
GATTCCGATTACGAAGCGCATGTTGCTGATTTCGGCCTCGCCAAATTCTTGCAGGATGCTGGTGCATCAGAGTGCATGTCCTCTATTGCTGGCTC
ATATGGTTACATTGCTCCAGAGTATGCATACACATTGAAAGTTGACCAAAAGAGTGATGTATACAGTTTTGGAGTTGTACTGTTGGAACTTATCA
CAGGTCACAAGCCAGTAGGTGAATTCGGGGACGGTGTAGATATAGTGAGATGGGTGAATAAAACAATGTCCGAATTATCTCAACCGTCTGATGCA
GCCTCAGTTTTAGCAGGCGTTGACTCGAGGCTACATAGTTACCCTCTTGCAAGTGTTGTCAATTTGGTCAAGATTGCTATG
GATCACGGATTCTCAGCTGAAATCCAAACACTAGGAAGGATCCGGCACAGAAACATCGTACGATTACTGGGATATGTCTCAAACAAAGACACAAA
CTTGTTGTTGTACGAATACATGTCAAATGGGAGCTTAGGTGAAATGTTACATGGTGCCAAAGGGGCACATTTGAAATGGGAGACAAGGTACCGTA
TTGCTGTGGAAGCTGCAAAAGGATTGTGTTATTTGCACCATGATTGTTCACCTTCGATTATTCACAGAGATGTCAAGTCCAATAATATTCTGCTG
GATTCCGATTACGAAGCGCATGTTGCTGATTTCGGCCTCGCCAAATTCTTGCAGGATGCTGGTGCATCAGAGTGCATGTCCTCTATTGCTGGCTC
ATATGGTTACATTGCTCCAGAGTATGCATACACATTGAAAGTTGACCAAAAGAGTGATGTATACAGTTTTGGAGTTGTACTGTTGGAACTTATCA
CAGGTCACAAGCCAGTAGGTGAATTCGGGGACGGTGTAGATATAGTGAGATGGGTGAATAAAACAATGTCCGAATTATCTCAACCGTCTGATGCA
GCCTCAGTTTTAGCAGGCGTTGACTCGAGGCTACATAGTTACCCTCTTGCAAGTGTTGTCAATTTGGTCAAGATTGCTATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541968] | SGN-U576274 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342843 [Download][View] | Facility Assigned ID: TUS63A13_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0045 | Quality Trim Threshold: 14.5 |
Working
