EST details — SGN-E541971
| Search information |
| Request: 541971 | Match: SGN-E541971 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191450 | Clone name: TUS-63-A16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91866 [cLEW-8-L4] | Trace: SGN-T112357 | EST: SGN-E300752 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191450 [TUS-63-A16] | Trace: SGN-T342848 | EST: SGN-E541973 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541971 | Length: 722 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E541971 [] (trimmed)
CTTATTAATATTTGGACAAATTATATAAAATATACTACAAATACATAACCTTAATATATATAAAAAGGGAACTTAGAACAATAATCAATCATACA
CAAGGCAATACATTCCCAACAACATTTAGGCCCTTGACCTCTTAATAACACACATTCTAATATTACCTCACCTCCAAGTCACACTCAAAATAAAT
TACAAAAATCAAAAGACAAGCAAGAAAAACCCCTCTTATCCACCAAATTCCAATTCAAAAAATATTTAATTATGCTTGTTAGTCATAAGCATTTT
TCCTGTCAAACCACAAGCCAAAGCTTCTCTAGGTATATTCTTAACAAGATGAACACCCTCAGCCAATATTACTCCCATTCCCATATGCAAATGAG
GCTCAATGTGACAATGAAAAGCCCAAACTCCTGGATTATCAGTCACAAATCTTAGTGCTGTCCATCCATAGGGATAAATCACAACAGTATTTCTC
AATGGTGGATTCTTTAAATTGAACTTCTTAACATCTTTGTCACTAAACTTCCCTTCACCATATCCCAAAACCCAAAAATCATGTCCATGTAAATG
CCATGGATGTATTTCACTTGCACCTTTACCTAATGCATTGGCATTTTGTAGTATAATGTCAATTGTATTATTCATCTTTAGCATATACACACCAT
TTCCATATGTAGCATTTAGAATTTGGTGCTTGTTTCATAACATCATAGTCTCTAGGG
CAAGGCAATACATTCCCAACAACATTTAGGCCCTTGACCTCTTAATAACACACATTCTAATATTACCTCACCTCCAAGTCACACTCAAAATAAAT
TACAAAAATCAAAAGACAAGCAAGAAAAACCCCTCTTATCCACCAAATTCCAATTCAAAAAATATTTAATTATGCTTGTTAGTCATAAGCATTTT
TCCTGTCAAACCACAAGCCAAAGCTTCTCTAGGTATATTCTTAACAAGATGAACACCCTCAGCCAATATTACTCCCATTCCCATATGCAAATGAG
GCTCAATGTGACAATGAAAAGCCCAAACTCCTGGATTATCAGTCACAAATCTTAGTGCTGTCCATCCATAGGGATAAATCACAACAGTATTTCTC
AATGGTGGATTCTTTAAATTGAACTTCTTAACATCTTTGTCACTAAACTTCCCTTCACCATATCCCAAAACCCAAAAATCATGTCCATGTAAATG
CCATGGATGTATTTCACTTGCACCTTTACCTAATGCATTGGCATTTTGTAGTATAATGTCAATTGTATTATTCATCTTTAGCATATACACACCAT
TTCCATATGTAGCATTTAGAATTTGGTGCTTGTTTCATAACATCATAGTCTCTAGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541971] | SGN-U581988 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342846 [Download][View] | Facility Assigned ID: TUS63A16_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.910 | Expected Error Rate: 0.0041 | Quality Trim Threshold: 14.5 |
Working
