EST details — SGN-E542217
| Search information |
| Request: 542217 | Match: SGN-E542217 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191592 | Clone name: TUS-63-G14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C89264 [cLEW-12-M15] | Trace: SGN-T113026 | EST: SGN-E298032 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191592 [TUS-63-G14] | Trace: SGN-T349552 | EST: SGN-E548677 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E542217 | Length: 752 bp (879 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E542217 [] (trimmed)
GGTCCGATCATAAACCTCCTTCGCGATGTCCAAAGGCAAATGATAACGATGTGTATTCACCTGGAAAATCGGTACCGATCTGGGAGATATTGAAG
GAGCAATATTCGATAGATCGATCCAAACTCTGCGGCAACAGCTCGGCTAATGATAAAGTTCAGGCTGCCGGAAAAGTTGACGGCGTTGCTGCCAG
AAAAGGTGTCAGATCTGTCACAGAAGGCAAGCCCTTTTTTTTTCATATTACTAGCTCCGTCTATTTTAACGTGTCTGTTTGGACTTCCATTGTAT
TTTAGTGCTGATGATTGAACTTTATAACTTCAACTTAAAATTAAGTGTCTGTAAGTATACTTAAAAACACTTAAAATAATTAAAACTCAAAACAG
ATTCATAAATTATAGTAAATCAATTTTATGAGGACTTTTGACATGTTTTTATTATTTTAGCTTCAAATGAAGTGCGTATAAGTACTTTTTGAATT
TATTCAAAAACTTCAAAAGGAATTATTTTAAATAAGTCTACTGTTTTTTAAGTTTATTTTAGGTAAAAGAATTAAGAAAATTTATTTATCTTTTT
TGATTTTCTTGAGAAATTCACTGTTTTGTCTATCTTTGATGATATTGAATGTGTCATTCAGGTGCTGAAATGAAGAAGCCTTGGTGTCAACTAAT
AGCAGAGTTTCCGCAGGTTTTCAAGTAGTAGTATTTAAAATTATTTCTATTTGTTTTAATTCGGGATTTGGTATACATCCTTATTAA
GAGCAATATTCGATAGATCGATCCAAACTCTGCGGCAACAGCTCGGCTAATGATAAAGTTCAGGCTGCCGGAAAAGTTGACGGCGTTGCTGCCAG
AAAAGGTGTCAGATCTGTCACAGAAGGCAAGCCCTTTTTTTTTCATATTACTAGCTCCGTCTATTTTAACGTGTCTGTTTGGACTTCCATTGTAT
TTTAGTGCTGATGATTGAACTTTATAACTTCAACTTAAAATTAAGTGTCTGTAAGTATACTTAAAAACACTTAAAATAATTAAAACTCAAAACAG
ATTCATAAATTATAGTAAATCAATTTTATGAGGACTTTTGACATGTTTTTATTATTTTAGCTTCAAATGAAGTGCGTATAAGTACTTTTTGAATT
TATTCAAAAACTTCAAAAGGAATTATTTTAAATAAGTCTACTGTTTTTTAAGTTTATTTTAGGTAAAAGAATTAAGAAAATTTATTTATCTTTTT
TGATTTTCTTGAGAAATTCACTGTTTTGTCTATCTTTGATGATATTGAATGTGTCATTCAGGTGCTGAAATGAAGAAGCCTTGGTGTCAACTAAT
AGCAGAGTTTCCGCAGGTTTTCAAGTAGTAGTATTTAAAATTATTTCTATTTGTTTTAATTCGGGATTTGGTATACATCCTTATTAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542217] | SGN-U577389 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343092 [Download][View] | Facility Assigned ID: TUS63G14_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.939 | Expected Error Rate: 0.0026 | Quality Trim Threshold: 14.5 |
Working
