EST details — SGN-E542454

Search information 
Request: 542454Match: SGN-E542454
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191730Clone name: TUS-63-M8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C89853 [cLEW-19-L11] Trace: SGN-T113567 EST: SGN-E302143 Direction: 5' Facility: TIGR
Clone: SGN-C191730 [TUS-63-M8] Trace: SGN-T343327 EST: SGN-E542452 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E542454Length: 696 bp (902 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E542454 [] (trimmed) GGAACAGGAAGATGGTGCAAAGGTAGTGAGAGTTAAAAATCTGAACAATCCGTATTGTATCAACCCTAATTGGAGATTCAAGCTCACACTGAACA
AACTTTATGCGTGGAGCCTCGTGGATTATGACAGGGTTGTCATGCTTGATGCAGATAACCTTTTCCTCCAGAAAACTGATGAACTGTTCCAATGT
GGCCAGTTTTGTGCTGTCTTCATCAATCCCTGCATCTTCCACACTGGTCTCTTCGTCTTACAGCCATCAAAAATGGTGTTCAATGACATGATTCA
TGAGATAGAGATTGGGAGGGAAAATCAAGACGGTGCAGACCAAGGTTTTATTGGAGGTCACTTCCCTGATTTACTTGATCGGCCGATGTTCCACC
CTACTCTTAATGGTACGCAGCTCCAGGGAAGTTACAGGCTTCCTCTAGGATATCAAATGGACGCGTCTTATTATTATCTCAAACTCCACTGGTCG
GTACCTTGTGGACCTAATAGTGTCATTACATTTCCTGGTGCTCCATGGTTAAAACCATGGTATTGGTGGTCATGGCCTGTCTTACCTTTGGGCAT
CCAGTGGCATGAACAGCGACGTCTAACTGTTGGGTACGGTGCTGAGATGATAGCAGTACTGATCCAATCTATATTCTACCTAGGAATAATTGCAG
TGACACGCCTAGCACGCCAAATTTTATCAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E542454] SGN-U584377 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T343329 [Download][View] Facility Assigned ID: TUS63M08_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5