EST details — SGN-E542466

Search information 
Request: 542466Match: SGN-E542466
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191737Clone name: TUS-63-M15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C89891 [cLEW-19-N2] Trace: SGN-T113752 EST: SGN-E302328 Direction: 5' Facility: TIGR
Clone: SGN-C191737 [TUS-63-M15] Trace: SGN-T343339 EST: SGN-E542464 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E542466Length: 807 bp (859 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E542466 [] (trimmed) GCGTTTAAGAAGCCCTAGCATTTCAGACTTTCCACCACATTATAGTGACTTTGAACAGTGGATTACAAAAAGTGTTAATTTGAATGATTATCAAC
TGCACATTGATTCGGTTGCATGGCAAAACGGTCCTAGGCTTAGGTTCTTTTTGAAATTCTTCCCTCCACGTGCAAATGACTCTGGAACCAATGAT
TTTGGAAAATTTAATGACAGCGAGATAGTACGGATCGCAAATAAGTTTGCCTTTTTTAATCTTACTGGAAATGATATCTTTGGCCCTTATGACCT
GCTCAATTTCACTGCCATGGCATATAATTCTGTCCTTTTTCCTCCGTTGGGAGAAGAGGGAAGCAGAAAAAACAGAGGCACTGTGGTTGGAATTG
TCTTAGGGTCCATATTTGCTGCAGCTGTGCTACTTATGGCCATAATATTCGTGTTGTTTAAAATGCGGCGGAGGTCACACGTTTCAAAAGATCAA
CCATTACCAAAATTTCCAATGCGAATAGAAGGTGTTAAGGCATTGGGTTTTAAGGAATTAGAGGCAGCAACTAACAGTTTTAGCAGTACTGCTGA
AATTGGCCAAGGAGGCTATGGAAAAGTCTACAAAGGCACTTTGGCAGAGGGAACAATAGTGGCAATAAAACGTGCACAACAAGGCTCATTACAGG
GGGAGAAAGAGTTCTATACTGAGATAGAATTACTGTCACGTGTACATCACCGAAATCTGGTTTCCTTGGTGGGATACTGTAATGAAAGAAGTGAA
CAAATGTTGGTGTATGAGTACATGCCAAATGGTTCCTTGCATGATCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E542466] SGN-U563210 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T343341 [Download][View] Facility Assigned ID: TUS63M15_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5