EST details — SGN-E542543
| Search information |
| Request: 542543 | Match: SGN-E542543 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191783 | Clone name: TUS-63-O13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
See unigene SGN-U585828 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C90349 [cLEW-22-C8] | Trace: SGN-T114033 | EST: SGN-E301135 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191783 [TUS-63-O13] | Trace: SGN-T343420 | EST: SGN-E542545 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E542543 | Length: 802 bp (893 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E542543 [] (trimmed)
CAGCAAAAGTTTCATGTCCCTCTTCTGCTTTACAGAGTGCAGGAACATCAGAAACATTGAGGTCCTTATTTAATAAAGAATGTCATAGGTTACAC
GTTAAGATCATCAATGTCTGAGTCATTAACAAAAGTATAAAGCCTCTACAGTTATTCTGCAAAGAATGAAGGGAGAGGGGAAAAGAACAAACATG
TAGGGGTGAACTGATATCAGTAGTAATTCATGTAATCAGCTACCAACATCCATCTTTATCGCACTTGCTTCCATTTCTATCCAGATCACAGAACA
AGAGTTGCCCATGGAGGAGAATCCATGCCGAACCTTTTAAACTTCAGAGGACAAATATAAGTAACGAGTTGTACATAGATGTCTGAACAAAACCA
ACCAAAATCACACTGGGATTCTTCAAGTTCATGTGCCCGTGTCAATAACCAAGCAATCCTGAACTTGGCATTGTGTGAGAAAATTACGGTTGACA
GTCAAATTAGCTTGCATATGGTGTGTTTTATGAGAACCATCCTTCAGCTACTTTTCTCGCTGTGTAACATGGCTGATCAGAGATTCCAAAATTAA
TACCATTGATTACCAGGTCCACCTGGTGCTGCAGCTACTTTTCTTGCTATGTACTGTTCAGGTTTAGGCTGCACCCCATTTGAAACTTCAGTACT
ATCTTCACCCCTTTCATTTTTACAGCTGGGATGTCTTCTAGGGTATGAAGTATTGGAAATGGGATATTGAGTTGGACCGCCAGGGTTCCTTGCAA
TTCTTCGCTGTTCAATGACTTCTGCTGCTGTAGCTGCTGCTC
GTTAAGATCATCAATGTCTGAGTCATTAACAAAAGTATAAAGCCTCTACAGTTATTCTGCAAAGAATGAAGGGAGAGGGGAAAAGAACAAACATG
TAGGGGTGAACTGATATCAGTAGTAATTCATGTAATCAGCTACCAACATCCATCTTTATCGCACTTGCTTCCATTTCTATCCAGATCACAGAACA
AGAGTTGCCCATGGAGGAGAATCCATGCCGAACCTTTTAAACTTCAGAGGACAAATATAAGTAACGAGTTGTACATAGATGTCTGAACAAAACCA
ACCAAAATCACACTGGGATTCTTCAAGTTCATGTGCCCGTGTCAATAACCAAGCAATCCTGAACTTGGCATTGTGTGAGAAAATTACGGTTGACA
GTCAAATTAGCTTGCATATGGTGTGTTTTATGAGAACCATCCTTCAGCTACTTTTCTCGCTGTGTAACATGGCTGATCAGAGATTCCAAAATTAA
TACCATTGATTACCAGGTCCACCTGGTGCTGCAGCTACTTTTCTTGCTATGTACTGTTCAGGTTTAGGCTGCACCCCATTTGAAACTTCAGTACT
ATCTTCACCCCTTTCATTTTTACAGCTGGGATGTCTTCTAGGGTATGAAGTATTGGAAATGGGATATTGAGTTGGACCGCCAGGGTTCCTTGCAA
TTCTTCGCTGTTCAATGACTTCTGCTGCTGTAGCTGCTGCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542543] | SGN-U585828 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343418 [Download][View] | Facility Assigned ID: TUS63O13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0008 | Quality Trim Threshold: 20.5 |
Working
