EST details — SGN-E542583

Search information 
Request: 542583Match: SGN-E542583
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191805Clone name: TUS-63-P11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C90443 [cLEW-22-J12] Trace: SGN-T114107 EST: SGN-E301209 Direction: 5' Facility: TIGR
Clone: SGN-C191805 [TUS-63-P11] Trace: SGN-T349612 EST: SGN-E548737 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E542583Length: 776 bp (883 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E542583 [] (trimmed) GTTTCTCTACCATACGCATTGATTCGCCTAGACGACCGGCCAACTCACCGGAGTTTTCCCCGTCGAGTACGGGTCAACGACTTCCTTTTCTCCAG
ATTTAACAAACTTTCCAGAAATTTCTCGAGAACAGTCTGTTATTTATTTTTATAATATATATATACAAACACATATATTCCTGCTTCGGTTTCAT
CAACGATACAGAGAAAAAAAGCACAGTGAAAGAGAAGAGAAGAAGATATGAGTGTTGATTACTATAAGACACTGAAAGTGTCACGTAATGCAAGT
GAAGAAGATTTGAAGAAATCGTATAAGAGATTGGCCATGAAATGGCATCCGGATAAGAATAGTGAGAATAAGAAGGAAGCTGAAGCGAAATTCAA
GCAGATATCTGAGGCTTATGATGTGCTGAGTGATCCTCAGAAGCGTCAGATCTATGATATATACGGTGATGAGGCACTGAAATCTGGTCAATTCG
ATCCATCCTCACCTAGTGATAGAAGAGGATTTAAGTTCAATTCGCGTGATGCGGAAGATATTTTCGCGGAATTTTTTGGTGGATCGGAGGGTATT
AGTAGGAAGTACTGGGTGGTACTGTACGGATTAGGAAAGCTGCGCCGGTGGAGAACAAGTTGCCGTGTACCTTGGAGGAGTTATACAAGGGCTCT
AAGAGGAAAATGAAGATTTCAGGATTGTTCTTGATGGCGCTGGTAAGCCCACAACTATTGAAGAAGTCTTGGCAATACACATAAAACCTGGTTGG
AAGAAGGCACAAAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E542583] SGN-U568089 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T343458 [Download][View] Facility Assigned ID: TUS63P11_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0083 Quality Trim Threshold: 14.5