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EST details — SGN-E542730

Search information 
Request: 542730Match: SGN-E542730
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191888Clone name: TUS-64-C22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C90765 [cLEW-24-A11] Trace: SGN-T114434 EST: SGN-E301311 Direction: 5' Facility: TIGR
Clone: SGN-C191888 [TUS-64-C22] Trace: SGN-T343604 EST: SGN-E542729 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E542730Length: 811 bp (881 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E542730 [] (trimmed) GCCTTTCCCAAAACGAAAGTTCCAGATCAGACTCGGAGAATCGGCTAAGGGAAAAAGAAAAAGGAGAGTGAAATCAGCACTGGTTGATGAAGCTG
CCGTTGCCTGGTGAGCTCCGATTACGAGTTCGAATTCCGACCTAACCGGGATAGTCGTTTCCTGATTTGATGATCCGATAGGCCTGAACAGTAAG
ATCCGAGAAGCTGAATTGGCGGGTTCTGAACAACCTGGTGCTTCTACACGTCCGAAGTGATCTGGCCCCTACCTAAATTAAGAGCTTTTTGGCAA
ATGGCTAGTTCTGGCTCCTCCCGTGCTGACTTGAAAAAGATGGAAGATGAGTTCAGAGCTTACGAGATGAGCCTCATGAATCCTCCCTCTTCCAT
CGATGACCTCTTCAAAATTCTTCAGAAAGTTGAGTCATCACTGAAAATGGTTAGTCAAGAACCATTTGATTCGACAATAAGTGCAATTCAACCTT
TAATGAAAGCACTGGTTAGGAATGAACTATTGGGGCATACAAGTGAAGATGTCAAAGTTTCAGTGATTTCTTCTGTCACTGAAATTTCTCGAATA
TATGCCCCAAATCGCCCTTACGATGATGATAGACAAATGGAGGAAATTCTCCGGCAAACCGTAATGACTTTCAAAAAGTTAGCTGATGTGACTAG
CCGCAGCTATCGTAAGGTGGTTCGAGTTCTGGAGTTATTCGCTAAAGTAAGGTTCACTGCGATGATATTGGACCTCGAGAATGAAACGCTAATCA
TCGAGATATTCAAAATTTTCTCGAGGTCATCAGGCCCTACCATCCTCATAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E542730] SGN-U576284 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T343605 [Download][View] Facility Assigned ID: TUS64C22_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5