EST details — SGN-E542785

Search information 
Request: 542785Match: SGN-E542785
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191920Clone name: TUS-64-E6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C90874 [cLEW-24-J12] Trace: SGN-T114511 EST: SGN-E301388 Direction: 5' Facility: TIGR
Clone: SGN-C191920 [TUS-64-E6] Trace: SGN-T343659 EST: SGN-E542784 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E542785Length: 657 bp (885 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E542785 [] (trimmed) GCCGTTTTCAACAATATCTCAGAATCAACACTGCCCATCCTAACCCAAACTACACTGCCGCCATTAACTACCTCACTAACTTCGCCAACTCCATC
CCTAATCTCCACTCCAAAATCATTCACCTTACCCCTACTTCGCCTCTCCTCCTATTAACCTGGCCAGGTTCAAACCCTTCACTCCCCTCCATTCT
TTTCAATTCCCATCTTGATTCTGTCCCTGCTGAACCACATAAATGGACCCACCCGCCGTTTTCCGCTCACAAGACTTCCGATGGAAGAATATTTG
CACGGGGAGCGCAGGATGATAAGTGTATTGGTATGCAGTATTTGGAAGCAATCAAAGCGATTCAAATGAGTGATTCAAAATTTGTGCCACTGAGA
AATGTTCATATTCTGTATGTGCCTGAAGAGGAGGTTGGTGGGTTTGATGGGATGGGGAAGTTTGTGGAGTCGAAAGAATTTGGAGAGTTGAATCT
TGGGTTTGTGATGGATGAAGGACAGGCCTCGCCTAATGATGAGTTTAGGGTTTTTTATGCTGATAGGACTCCTTGGCATACGGTGATTAAGGCTG
TTGGAATGCCTGGACATGGGTCTAAATTGTATGATAATTCTGCTATGGAGAATTTGATGAAGAGTATGGAGGTTATTACTAAGTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E542785] SGN-U582789 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T343660 [Download][View] Facility Assigned ID: TUS64E06_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5