EST details — SGN-E542801
| Search information |
| Request: 542801 | Match: SGN-E542801 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191930 | Clone name: TUS-64-E16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C90937 [cLEW-24-P17] | Trace: SGN-T114400 | EST: SGN-E301277 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191930 [TUS-64-E16] | Trace: SGN-T343677 | EST: SGN-E542802 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E542801 | Length: 844 bp (893 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E542801 [] (trimmed)
GAACAGAGCAAAACTAATGTATTACACTAACTAATCCACACATACAATACAAGTTTTAGGAATTAAAACCACCCCTCATATCACACACTTCCTAA
AGCCAACATCTGATAATACACGACACTGAATGACCACATACCATACACCTCCAAGAACCACTAATCTATTCAATCCAGTTTTCATACTATCTGTT
AATCACAACTTTTTTTGATCTGTTGGTCTGCTACTCCCACCTGTTCGATTAGCTTCTCCCACTCTTGATGCCAAAGCAAGAACTTCAGGTGACAT
CTCCCAGCTTCCACTTTTCCTTCCCCAGCTTGATCCTCTAGGATGTATTCCTGCACGATCACTCTCATCTACTGTACTTCTTATCTCAGGAGACA
TTTGCCCTAACATGCCATCTTTAATGTTCAGGCCATCATTGTCGCTAAGTTGTCCTTCGTTATCCCCTACTTCACTCCAAACCGCTTTCCTGCCC
ATTTCTATGTCCTCCACAGCCTTCCCCATGTTTGGACTCACAAAACCCCCACCTGCAGATCGAGTTGCCACCTTGGGTTCCCTGGGCACCTTTGC
ACGGAAATTGTTCTTGGATGGAGGAATACTAGTACAAAATATCTCCTTGAAATTCTGCATCACTCCTCTGTTGTAGGGATTGGCACGCCAATCAT
ATCGGTATCTAAAATTCTCATAAGTAGTCTGATTAGTACTGATGAGGTATAGATGAAAAGCAGTAAGACCTCCAACAAACCATACTGATATAAAA
GTGTATGCTATTAGAACAATGGAAGCCGGTGTTTTGATCATTGCTTTCCATATGGTGGTGTCATCTAGAAACATGATTCTCTTA
AGCCAACATCTGATAATACACGACACTGAATGACCACATACCATACACCTCCAAGAACCACTAATCTATTCAATCCAGTTTTCATACTATCTGTT
AATCACAACTTTTTTTGATCTGTTGGTCTGCTACTCCCACCTGTTCGATTAGCTTCTCCCACTCTTGATGCCAAAGCAAGAACTTCAGGTGACAT
CTCCCAGCTTCCACTTTTCCTTCCCCAGCTTGATCCTCTAGGATGTATTCCTGCACGATCACTCTCATCTACTGTACTTCTTATCTCAGGAGACA
TTTGCCCTAACATGCCATCTTTAATGTTCAGGCCATCATTGTCGCTAAGTTGTCCTTCGTTATCCCCTACTTCACTCCAAACCGCTTTCCTGCCC
ATTTCTATGTCCTCCACAGCCTTCCCCATGTTTGGACTCACAAAACCCCCACCTGCAGATCGAGTTGCCACCTTGGGTTCCCTGGGCACCTTTGC
ACGGAAATTGTTCTTGGATGGAGGAATACTAGTACAAAATATCTCCTTGAAATTCTGCATCACTCCTCTGTTGTAGGGATTGGCACGCCAATCAT
ATCGGTATCTAAAATTCTCATAAGTAGTCTGATTAGTACTGATGAGGTATAGATGAAAAGCAGTAAGACCTCCAACAAACCATACTGATATAAAA
GTGTATGCTATTAGAACAATGGAAGCCGGTGTTTTGATCATTGCTTTCCATATGGTGGTGTCATCTAGAAACATGATTCTCTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542801] | SGN-U566382 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343676 [Download][View] | Facility Assigned ID: TUS64E16_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 14.5 |
Working
