EST details — SGN-E542911
| Search information |
| Request: 542911 | Match: SGN-E542911 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191994 | Clone name: TUS-64-H8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91250 [cLEW-26-I7] | Trace: SGN-T114709 | EST: SGN-E302877 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191994 [TUS-64-H8] | Trace: SGN-T343787 | EST: SGN-E542912 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E542911 | Length: 608 bp (859 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E542911 [] (trimmed)
CATAGTACATTGACTTGCAAAATAAATTTCAAAAAAGAATCAAATCCTGTGAGTTCCAAATGACAAATATATTATAGTTCCAAGAAACTGGAGAT
TGATAAATTACAATAACGGTATACAACACTAATCTAGAGTACACTATTACATGGAATCACTATTGATGAACGAAAATCATAACTTGCTCTGAGAT
TTTCAAGCCCTGTGCCTTTTCAATTGCCACACCAGAGATCATCTTTGATATCCTACAAGACTGTTGTGGGGCAAATGTTGCTTTAAGCAGAACAG
ACGCTGTATTCTCCTTCCTTTTCTGCGACCATGCGTATACAAAAGCAAGCAAGCAAGCCTTTGAACAGACACATTTCATCCATATTCATGTCACG
ACCCTCGGAAGTGGAGACCAGTTGGCACAGGTTCAAGTATCTCTACCTTAGTTTCAGGAGAATGGGGATTTGATTCTGAAGGTTATGCAGTGGTC
ATGGTTATCACCCCTTTCACGAAAAATAATGCTGACAATCATTTCTTGATGCATACATTTGACGACCTAAAGGAAATAAGATAACTGCTGCTTTT
TCCTAGAACCGCCTTCTCCATAGAAGTCATTCCACTGC
TGATAAATTACAATAACGGTATACAACACTAATCTAGAGTACACTATTACATGGAATCACTATTGATGAACGAAAATCATAACTTGCTCTGAGAT
TTTCAAGCCCTGTGCCTTTTCAATTGCCACACCAGAGATCATCTTTGATATCCTACAAGACTGTTGTGGGGCAAATGTTGCTTTAAGCAGAACAG
ACGCTGTATTCTCCTTCCTTTTCTGCGACCATGCGTATACAAAAGCAAGCAAGCAAGCCTTTGAACAGACACATTTCATCCATATTCATGTCACG
ACCCTCGGAAGTGGAGACCAGTTGGCACAGGTTCAAGTATCTCTACCTTAGTTTCAGGAGAATGGGGATTTGATTCTGAAGGTTATGCAGTGGTC
ATGGTTATCACCCCTTTCACGAAAAATAATGCTGACAATCATTTCTTGATGCATACATTTGACGACCTAAAGGAAATAAGATAACTGCTGCTTTT
TCCTAGAACCGCCTTCTCCATAGAAGTCATTCCACTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542911] | SGN-U566431 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343786 [Download][View] | Facility Assigned ID: TUS64H08_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0033 | Quality Trim Threshold: 14.5 |
Working
