EST details — SGN-E542929

Search information 
Request: 542929Match: SGN-E542929
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192004Clone name: TUS-64-H18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C91265 [cLEW-26-K15] Trace: SGN-T114821 EST: SGN-E302989 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E542929Length: 696 bp (878 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E542929 [] (trimmed) GAATTGGCTGAAGCTTTCTGAGTTCGTTCTATCCAAAAAATGGGAATCAAGGGTTTAATGAAGCTGTTGGCTGACAATGCTCCAAGTGGAATGAA
GGAGCAGAAGTTCGAGAGCTATTTCGGCCGTAAAATAGCCATCGACGCTAGTATGAGCATTTATCAGTTCCTGATTGTAGTAGGACGAAGCGGTA
CGGAAATGCTCACTAACGAAGCTGGGGAAACTACTAGTCATTTGGTCGGGATGTTTTCGCGGACGATTAGGCTTTTGGAAGCTGGAATCAAGCCA
GTTTATGTTTTTGATGGCAAGCCCCCTGATTTGAAGAAACAAGAACTTGCAGAACGTTACTCTAGAAGGGAAGATGCCACAGATGACTTGGCTAA
GGCTACAGAGAGTGGCAACGAGGAGGATATTGAGAAATTCAGCAAGAGAACTGTAAAGGTTACATCACAACACAATGATGACTGCAAAAAACTTC
TCAGACTAATGGGGGTACCTGCTGTTGAGGCTCCTTCTGAAGCAGAGGCTCAGTGTGCTGCACTTTGCAAGGCAGAAAAGGTTTATGCTGAGGCC
TCAGAAGATATGGATTCCTTAACTTTTGGAGCTCCAAAGTTTCTTCGCCATTTAATGGATCCTAGCTCCAAAGAGATACCAGTGATGGAATTTGA
CATCTCCTAGGTATTGGAGGGACTTGAACTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E542929] SGN-U575786 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T343804 [Download][View] Facility Assigned ID: TUS64H18_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0106 Quality Trim Threshold: 14.5