EST details — SGN-E542995

Search information 
Request: 542995Match: SGN-E542995
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192043Clone name: TUS-64-J9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C91429 [cLEW-27-I18] Trace: SGN-T115019 EST: SGN-E302436 Direction: 5' Facility: TIGR
Clone: SGN-C192043 [TUS-64-J9] Trace: SGN-T343871 EST: SGN-E542996 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E542995Length: 649 bp (897 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E542995 [] (trimmed) TATTTCTAGTATGGTCAAGACATAACAAAATGAGGGGGAAATAATGTCAACATACCATTGGAAAATCTCGCTCAAAATCATCCAATACAGAAGGG
ATCAAAATGCTCGTCGGGCCATCTTTTTAGGTTTCTTCACATAACTAAGGCGAATTTTCTTTAGTTTTGTCCTCTTTCTAGCCATTTTCTCTGGA
AACGTCTCCCTCTTCTTTTCCTCCTTCTTGGCAGGGGCGGATTTCTTCTTTGCATATTTTGGGTGCACCATATAGGCCTTTGGTTCAACTGCCAG
ATCATTGCTCTCGGCTTCCTTATATAGTGCATTTGCTTTGTCAACCCGATTATGAGCAACCATTTTTCCGATCAACAAGTCGTATGTCTTTAACC
CCGGTTTGCAACCATCCTCTTTCATCTTTGCAAAGACACTCATAGCATGATCCAATCTTTCAATCCCACATAATATTTTCAAGAATTCATAATAG
GCCTTCTTATCAAGCGCATCCCCAAATCCTGCAGATCTCATCCTATCAATCATTTCATCACCTTCTCCAACTCTAGCAGCCTGGTACAAGCTCCT
AATAAGAGTGAGAAACGTTGTTTCATCGGGATTACAACCCCACTCCCCCATCCTATAAAACAGATTCAAAGCATCCTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E542995] SGN-U583874 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T343870 [Download][View] Facility Assigned ID: TUS64J09_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0064 Quality Trim Threshold: 14.5