EST details — SGN-E543015
| Search information |
| Request: 543015 | Match: SGN-E543015 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192054 | Clone name: TUS-64-J20 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91490 [cLEW-27-O8] | Trace: SGN-T114962 | EST: SGN-E302379 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192054 [TUS-64-J20] | Trace: SGN-T343889 | EST: SGN-E543014 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543015 | Length: 796 bp (878 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E543015 [] (trimmed)
GCATTTCCAAATTCAACTCCCTGCTATTCCAAAAAGTGTTGTCAACAAGCTGTCAATAAAGGAGACTGCACGACGTCGTTCTGAAATCTCCGAAT
TACCGGTGAAAGTTCCTTAGTTTCCGGTATCTGATGGCGATCGCCGACGAGAAGGACGGTAAAGTTTGGGGACTGTTTAAGCTCCCTTTTCGAAA
CGCACAGTCAACGACGACTTCGCGTTCGTCTTCGCATAATACTCTTCATTACCGCAGTCAACAACATCAATCTCTCGGAAATACTTCTCTGGATG
ATGGATCGGTTCCTCGTAGCAACAGTTCCAGCTCCGTTTCTTCAGTAGCCAGGTCTTTGCTTCCTGCACGCCGTCGGTTGAAACTTGATCCTTCC
AATAAGCTTTATTTTCCTTATGAACCTGGTAAGCAAGTTCGAAGTGCTATCAAGATAAAAAACTCCAGCAAGTCTCACGTAGCTTTCAAGTTCCA
AACAACTGCACCCAAAAGCTGTTTCATGCGTCCTCCCGGAGCAATTCTCGCCCCCGGTGAGAGCATCATTGCAACCGTATTCAAGTTTGTAGAGC
ATCCAGAAAATAATGAAAAACCAATGGACCAGAAGAGCAGAGTGAAGTTCAAGATCATGAGCCTCAAGGTGAAAGGACCGATGGACTATGTACCT
GAGCTGTTTGAAGAGCAAAAGGATCAAGTAGCCGTAGAGCAAATTCTGCGGGTTATCTTTCTCGATGTGGAACGTCCTAGTCCAACTTTGGAAAA
AATTGAGCGCCAGCTGGCGGAAGCAGACGCTGCTCT
TACCGGTGAAAGTTCCTTAGTTTCCGGTATCTGATGGCGATCGCCGACGAGAAGGACGGTAAAGTTTGGGGACTGTTTAAGCTCCCTTTTCGAAA
CGCACAGTCAACGACGACTTCGCGTTCGTCTTCGCATAATACTCTTCATTACCGCAGTCAACAACATCAATCTCTCGGAAATACTTCTCTGGATG
ATGGATCGGTTCCTCGTAGCAACAGTTCCAGCTCCGTTTCTTCAGTAGCCAGGTCTTTGCTTCCTGCACGCCGTCGGTTGAAACTTGATCCTTCC
AATAAGCTTTATTTTCCTTATGAACCTGGTAAGCAAGTTCGAAGTGCTATCAAGATAAAAAACTCCAGCAAGTCTCACGTAGCTTTCAAGTTCCA
AACAACTGCACCCAAAAGCTGTTTCATGCGTCCTCCCGGAGCAATTCTCGCCCCCGGTGAGAGCATCATTGCAACCGTATTCAAGTTTGTAGAGC
ATCCAGAAAATAATGAAAAACCAATGGACCAGAAGAGCAGAGTGAAGTTCAAGATCATGAGCCTCAAGGTGAAAGGACCGATGGACTATGTACCT
GAGCTGTTTGAAGAGCAAAAGGATCAAGTAGCCGTAGAGCAAATTCTGCGGGTTATCTTTCTCGATGTGGAACGTCCTAGTCCAACTTTGGAAAA
AATTGAGCGCCAGCTGGCGGAAGCAGACGCTGCTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543015] | SGN-U582470 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343890 [Download][View] | Facility Assigned ID: TUS64J20_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0009 | Quality Trim Threshold: 14.5 |
Working
