EST details — SGN-E543044
| Search information |
| Request: 543044 | Match: SGN-E543044 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192071 | Clone name: TUS-64-K13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192071 [TUS-64-K13] | Trace: SGN-T343918 | EST: SGN-E543043 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543044 | Length: 744 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E543044 [] (trimmed)
GATCAAATTCCCTCAATAATGCAAACAAATTATATTTCCCCAAATTAAAGCAAAAAATTGAATTTGGTCTTATAAGAAAATGGATTCATATAAGA
ATGAAGAAGAAACAAGTGATGATCATAATAATGATGAACAAGAAGAAAGTGGATGGACAACTTATTTGGAGGATTTTTCAATGGAACAACATAAC
AATAACAGCATTAATAATAATAATAGTGAAATTAGCACATATTGTGATAGTTTTGGAAGTCCATCTTTGTTGTCTGATGCTGCTTCTCATGATGT
TTGGAACAATAATCATCAAGTCATGATTAATACAAGTAATTATGGCTCAACATTTCTTAAGAGATTAAATTTGAAGAAACCAAGGAACAACAAAA
TCTCTGATCCTGATTTACAAGACACTGCTAGCTCACCTGTCAATAGTCCAAAGGTAAGTAATTTTAATAAGCAGATGGACATCAATTACCGAAGA
GGAGACAACAATAATAATGGAAATTTTCAGGGATTTGAAGGTAGCTCTAGACTACATCAAGAAATGGAAACAATATAAAAGAATAGTAGTATGTG
TTTTGATGAAAGGAACAAAAGTTATATGGACCTCAAGAAGAATGGACTATGTTTGGGTCCTTTGTCCATGTTGGTCAACTATAGAGGGTGATGTT
CATATGAGCTGCGCGTTTTCGTTTGAGATACATAAGTATGATTTCGAAAGTGATGGTGATTTGTCATATTAAGCCTCAC
ATGAAGAAGAAACAAGTGATGATCATAATAATGATGAACAAGAAGAAAGTGGATGGACAACTTATTTGGAGGATTTTTCAATGGAACAACATAAC
AATAACAGCATTAATAATAATAATAGTGAAATTAGCACATATTGTGATAGTTTTGGAAGTCCATCTTTGTTGTCTGATGCTGCTTCTCATGATGT
TTGGAACAATAATCATCAAGTCATGATTAATACAAGTAATTATGGCTCAACATTTCTTAAGAGATTAAATTTGAAGAAACCAAGGAACAACAAAA
TCTCTGATCCTGATTTACAAGACACTGCTAGCTCACCTGTCAATAGTCCAAAGGTAAGTAATTTTAATAAGCAGATGGACATCAATTACCGAAGA
GGAGACAACAATAATAATGGAAATTTTCAGGGATTTGAAGGTAGCTCTAGACTACATCAAGAAATGGAAACAATATAAAAGAATAGTAGTATGTG
TTTTGATGAAAGGAACAAAAGTTATATGGACCTCAAGAAGAATGGACTATGTTTGGGTCCTTTGTCCATGTTGGTCAACTATAGAGGGTGATGTT
CATATGAGCTGCGCGTTTTCGTTTGAGATACATAAGTATGATTTCGAAAGTGATGGTGATTTGTCATATTAAGCCTCAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543044] | SGN-U569044 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343919 [Download][View] | Facility Assigned ID: TUS64K13_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.927 | Expected Error Rate: 0.0142 | Quality Trim Threshold: 14.5 |
Working
