EST details — SGN-E543053
| Search information |
| Request: 543053 | Match: SGN-E543053 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192076 | Clone name: TUS-64-K18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C93949 [cLEX-1-K22] | Trace: SGN-T115249 | EST: SGN-E302666 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192076 [TUS-64-K18] | Trace: SGN-T343927 | EST: SGN-E543052 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543053 | Length: 679 bp (873 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E543053 [] (trimmed)
GGGTAAACTCTCTTTCAACATCTTTTCTAGTTACCAAATCATCTTTTACAACAAGGACAGTAAGATTGCCTGTCCATAGACGAGTAGTGTTTGCA
TCATCATCATCATCGTCATCGTCAACAACTCCATGTCAGATCAAATCAACTTCGAAAAATGGGCTTAAGGTATTTGAAGATAAGTCAACGGGTGT
AGTTTGTTATAGAGATGAATATGGAGAAATCACATGTGAAGGATATGATGAAGGCCCTCGTTTTTGTCACCAACCCCCAAAGTCTCCTTCTAAAT
CAAGAGATGAAGAGATTGTAGAGCTCCTCCAAAGAAATTGGTTTCATATAGCTGATGTTGCTGTGGAATGAAGAGATTTTGTGCATTCTTAACGG
GTTAAATCAACTCGATTATATATATGCTTCAACTTTAAGCTAATTAGATATTGTTACTCGAATATTATGTATCCGTTCTGTTCTATTCAAACTCA
TGATAGTTGTCGTTATTCTAATAGCTAGTATAATTTCACAAAAAAATGAGGGGTATTGGCTTGCTTTTTTTTTTCTTTATTAATTAAAATGTATA
TAAGTAGTACAACTTGTGTATTAACAATTTATTTTTCACTTTCAACCTAATGTTTTGCTTCCAATCCTCACAATTTGTATATATAAGAATGGATT
TTACTGTTTAGTGA
TCATCATCATCATCGTCATCGTCAACAACTCCATGTCAGATCAAATCAACTTCGAAAAATGGGCTTAAGGTATTTGAAGATAAGTCAACGGGTGT
AGTTTGTTATAGAGATGAATATGGAGAAATCACATGTGAAGGATATGATGAAGGCCCTCGTTTTTGTCACCAACCCCCAAAGTCTCCTTCTAAAT
CAAGAGATGAAGAGATTGTAGAGCTCCTCCAAAGAAATTGGTTTCATATAGCTGATGTTGCTGTGGAATGAAGAGATTTTGTGCATTCTTAACGG
GTTAAATCAACTCGATTATATATATGCTTCAACTTTAAGCTAATTAGATATTGTTACTCGAATATTATGTATCCGTTCTGTTCTATTCAAACTCA
TGATAGTTGTCGTTATTCTAATAGCTAGTATAATTTCACAAAAAAATGAGGGGTATTGGCTTGCTTTTTTTTTTCTTTATTAATTAAAATGTATA
TAAGTAGTACAACTTGTGTATTAACAATTTATTTTTCACTTTCAACCTAATGTTTTGCTTCCAATCCTCACAATTTGTATATATAAGAATGGATT
TTACTGTTTAGTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543053] | SGN-U565201 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343928 [Download][View] | Facility Assigned ID: TUS64K18_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 12.5 |
Working
