EST details — SGN-E543401

Search information 
Request: 543401Match: SGN-E543401
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192279Clone name: TUS-65-D5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C94979 [cLEX-6-K13] Trace: SGN-T116066 EST: SGN-E304048 Direction: 3' Facility: TIGR
Clone: SGN-C94979 [cLEX-6-K13] Trace: SGN-T116204 EST: SGN-E304186 Direction: 5' Facility: TIGR
Clone: SGN-C192279 [TUS-65-D5] Trace: SGN-T349747 EST: SGN-E548872 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E543401Length: 788 bp (872 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E543401 [] (trimmed) GGTTAAAGAAAGGAATATCGAGGCAATTCTCAACAGAGTTGTTTAGGAAGAGTGGAAAATTCAGTTTCAAGAGGCAGAGTTCATTGGATCCAAGG
AGGAACAATTTGCGGTTTAGTTTTGGGAGGCAATCATCGCTTGATCCGCTTCGAAGGAGCCCTTCGATAGAAAATGCTGAGAGAACTGTGCCAGA
GAATCTTGATTCGACGATGCAGCTGTTATTCATGGCGTGTAAAGGGGACGTGAAGGGAGTTCAGGACTTGTTGGATGAAGGTATTGATGTGAATA
GCATTGATTTGGATGGAAGGACTGCTCTTCATATTGCTGCCTGTGAAGGTCACGTGGAAGTTGCCAAGCTATTGTTGAGTAGGAAGGCTAATATG
AATGCTCGTGATCGGTGGGGTAGTACGGCAGCAGCTGATGCCAAACATTATGGTAATGCTGAAGTTTACGAAATGTTGAAGGCCCGTGGAGCCAA
AGTCCCGAAAGTCGGAAAGACGCCAATGGCTGTAGCAAATCCACGAGAAGTTCCAGAATATGAACTAAACCCTCTGGAGCTTCAAATCCGCAAAA
GTGATGGAATCTCAAAGGGTTCATATCAAGTTGCCAAATGGAATGGAACGAAAGTTTCCGTAAAAATACTTGACAAGGATAGCTATAAAGATCCT
GAAAGCATAAATGCTTTCAAACATGAATTAACTTTGCTAGAAAAAGTGCGGCATCCAAATGTAGTTCAGTTTGTTGGAGCAGTTACACAAATATA
CCAATGATGATAGTGTCAGAGTATCATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543401] SGN-U569625 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344276 [Download][View] Facility Assigned ID: TUS65D05_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0019 Quality Trim Threshold: 14.5