EST details — SGN-E543516
| Search information |
| Request: 543516 | Match: SGN-E543516 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192346 | Clone name: TUS-65-F24 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92207 [cLEX-10-H8] | Trace: SGN-T116833 | EST: SGN-E305059 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192346 [TUS-65-F24] | Trace: SGN-T349766 | EST: SGN-E548891 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543516 | Length: 781 bp (931 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543516 [] (trimmed)
GCGTTAAAAATAAGATTGCAAAAGCTTTACCTGTTTGGTATACAAAACAATCTTCACATTGATCATCTAGGAGAGAGGATCAATGTCAAGTCAAG
TCCAAAATAGAAGAATAAACAATCGCCAACTTGTATGTGCCAAACAATCCTATATCAGCTTTCACTACTGAAACATAATTGTTTTTGGTGAGAAT
GGAAATAAAACATACAAAGATGGCTTATTAAAAATTTTCTATGATCAAGTCTCCAATAGAATGTACCCCCAGACTCCTTAGCCGCGGAATTCATC
CATGAACAGCTTATGGAATTCTGTAAGACGAGATACAATAGCTGGTATCTTCTCTTCTTGCGGTAATATTGTGCACCTAAAATGCCACGTTCCAG
GACGCTGGCCAAATCCAGAGCCTGGGACAACAACAATTCCGGTAGCATTAAGGAGGTGCCGAGCATAAAATGCATCTGGTGCAATTTTAGCTTCT
TCTGCTGCTTTTATTGCTTTGTCAGGTAAGTTGATACGTGGAAATAGATACATTGCACCCTCTGCTTTATTGCATGTTACTCCCTCCAAATTACT
GAATGCATCTTCTAGTGTCTTTGCACGTCTTGCCAAGGATGAAAGTATCCCTTCTTTCTCAGCAGCAAAAGACTCGTATGATTCATCACCCACCT
TCGGAGGGCTCATGACAAGGCTCGCAAGAATCTGACCAGAAATGTTGGAACACAGATTGACAGATGCCACTTTTGATATCTGTTCTCTTATCTCA
GGGCTAAATCCAGTAACCTCC
TCCAAAATAGAAGAATAAACAATCGCCAACTTGTATGTGCCAAACAATCCTATATCAGCTTTCACTACTGAAACATAATTGTTTTTGGTGAGAAT
GGAAATAAAACATACAAAGATGGCTTATTAAAAATTTTCTATGATCAAGTCTCCAATAGAATGTACCCCCAGACTCCTTAGCCGCGGAATTCATC
CATGAACAGCTTATGGAATTCTGTAAGACGAGATACAATAGCTGGTATCTTCTCTTCTTGCGGTAATATTGTGCACCTAAAATGCCACGTTCCAG
GACGCTGGCCAAATCCAGAGCCTGGGACAACAACAATTCCGGTAGCATTAAGGAGGTGCCGAGCATAAAATGCATCTGGTGCAATTTTAGCTTCT
TCTGCTGCTTTTATTGCTTTGTCAGGTAAGTTGATACGTGGAAATAGATACATTGCACCCTCTGCTTTATTGCATGTTACTCCCTCCAAATTACT
GAATGCATCTTCTAGTGTCTTTGCACGTCTTGCCAAGGATGAAAGTATCCCTTCTTTCTCAGCAGCAAAAGACTCGTATGATTCATCACCCACCT
TCGGAGGGCTCATGACAAGGCTCGCAAGAATCTGACCAGAAATGTTGGAACACAGATTGACAGATGCCACTTTTGATATCTGTTCTCTTATCTCA
GGGCTAAATCCAGTAACCTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543516] | SGN-U580998 | Tomato 200607 | Build 2 | 69 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344391 [Download][View] | Facility Assigned ID: TUS65F24_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 14.5 |
Working
