EST details — SGN-E543553
| Search information |
| Request: 543553 | Match: SGN-E543553 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192367 | Clone name: TUS-65-G21 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92314 [cLEX-10-N16] | Trace: SGN-T116766 | EST: SGN-E304992 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192367 [TUS-65-G21] | Trace: SGN-T344427 | EST: SGN-E543552 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543553 | Length: 625 bp (893 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E543553 [] (trimmed)
GTTTTCTCTCAAAGCAAAAATGGGGTTGTTTAACATGTCATTGTTACTTATGACTTGTCTCATGGTATTAGCCATATTTCACTCTTGTGATGCTC
AAAATTCACCCCAAGACTATCTTGAGGTTCACAACGACGCCCGTGCCCAAGTCGGAGTCGGGCCAATGTCTTGGGATGCCGACTTGGAATCCCGA
GCACAAAGCTATGCCAACTCAAGAGCGGGTGATTGTAACTTGATTCATTCTGGTTCAGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGG
GAGGGCCGCTGTGGAATTGTGGGTGTCGGAAAAGCCAAACTACAACTACGATACGAATGAATGTGTTAGCGGAAAAATGTGCGGACATTATACTC
AAGTAGTCTGGCGTGACTCAGTTCGACTAGGTTGTGGTCGGGCTCTTTGCAACGACGGGTGGTGGTTTATTTCTTGCAACTATGATCCTGTAGGC
AATTGGGTCGGACAACGTCCTTACTAAAATGTTTTTTTTTTTTTGTATGATGTGTAAGGGATCAAATAATTATTATTATTTCCCTTTGATGTTTG
CTAGTATGAATAATTCCACATACCATATGTTCATGGTATAGTGGGGCTTAAGTTG
AAAATTCACCCCAAGACTATCTTGAGGTTCACAACGACGCCCGTGCCCAAGTCGGAGTCGGGCCAATGTCTTGGGATGCCGACTTGGAATCCCGA
GCACAAAGCTATGCCAACTCAAGAGCGGGTGATTGTAACTTGATTCATTCTGGTTCAGGGGAGAATCTTGCCAAGGGTGGTGGTGACTTCACGGG
GAGGGCCGCTGTGGAATTGTGGGTGTCGGAAAAGCCAAACTACAACTACGATACGAATGAATGTGTTAGCGGAAAAATGTGCGGACATTATACTC
AAGTAGTCTGGCGTGACTCAGTTCGACTAGGTTGTGGTCGGGCTCTTTGCAACGACGGGTGGTGGTTTATTTCTTGCAACTATGATCCTGTAGGC
AATTGGGTCGGACAACGTCCTTACTAAAATGTTTTTTTTTTTTTGTATGATGTGTAAGGGATCAAATAATTATTATTATTTCCCTTTGATGTTTG
CTAGTATGAATAATTCCACATACCATATGTTCATGGTATAGTGGGGCTTAAGTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543553] | SGN-U578064 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344428 [Download][View] | Facility Assigned ID: TUS65G21_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 1.016 | Expected Error Rate: 1.0000 | Quality Trim Threshold: 14.5 |
Working
