EST details — SGN-E543656
| Search information |
| Request: 543656 | Match: SGN-E543656 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192427 | Clone name: TUS-65-J9 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92609 [cLEX-11-O1] | Trace: SGN-T117032 | EST: SGN-E304676 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192427 [TUS-65-J9] | Trace: SGN-T344530 | EST: SGN-E543655 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543656 | Length: 790 bp (871 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E543656 [] (trimmed)
GAGTTTTTTATGACCCCTTAGCACATTTTGTCACATATTTAACACAAAAACATGTTGCTTAATTCCTATTATTCAACTTAAGTTAGCAAGCAAGA
ACTATCAATGGCAGAAAAAAATGAATCCAATAATAGTGAAGATGGTAGGTGGACTCTTCAAGGGAAAACTGCCCTTGTTACTGGAGGCACTAAAG
GCATAGGGTAAATTTTCAATCTTTCTCAGACTCCAGTTATAGTATTGAATTTATTATTGTTATTGTATTGTTATTGTTTTGGTTAAAAATTAGGC
ATGCCATAGTAGAAGAATTAGCTGGATTTGGTGCTACAGTTTATACATGTTGTAGAAACCAAGAACAACTTGATGAGTGTTTAGAGAAATGGAGA
GGCAAAGGTTACAAAGTAGAAGGATGTGTATGTGATTTGACTTTGAGATCCCAAAGAGAGATGCTTATGGAGAAGGTTATCAATTTTTTCCAAGG
AAAACTCAACATTCTAATAAATAATGCAGGTATACTAATAGTTAAGCCAGCTACAGAGTTCACTGAGGATGATTACTCTATTCTTATGAAAACCA
ATTTTGAAGCTTCTCACCACATCTCCCAAATTGCACACCCAATTTTGAAGGCCTCAGAAAGTGGAAACATTGTCTTCATCTCTTCTATTGCTGGG
CTTGTGGCATTGCCAACAAATTCCATCTATGCAGCAACTAAAGGTGCAATGAATCAACTTACAAGGAGTTTGGCTTACGAATGGGCTAAAGATAA
TATTCGAGTGAACGCAGTAGCACCTTGGAT
ACTATCAATGGCAGAAAAAAATGAATCCAATAATAGTGAAGATGGTAGGTGGACTCTTCAAGGGAAAACTGCCCTTGTTACTGGAGGCACTAAAG
GCATAGGGTAAATTTTCAATCTTTCTCAGACTCCAGTTATAGTATTGAATTTATTATTGTTATTGTATTGTTATTGTTTTGGTTAAAAATTAGGC
ATGCCATAGTAGAAGAATTAGCTGGATTTGGTGCTACAGTTTATACATGTTGTAGAAACCAAGAACAACTTGATGAGTGTTTAGAGAAATGGAGA
GGCAAAGGTTACAAAGTAGAAGGATGTGTATGTGATTTGACTTTGAGATCCCAAAGAGAGATGCTTATGGAGAAGGTTATCAATTTTTTCCAAGG
AAAACTCAACATTCTAATAAATAATGCAGGTATACTAATAGTTAAGCCAGCTACAGAGTTCACTGAGGATGATTACTCTATTCTTATGAAAACCA
ATTTTGAAGCTTCTCACCACATCTCCCAAATTGCACACCCAATTTTGAAGGCCTCAGAAAGTGGAAACATTGTCTTCATCTCTTCTATTGCTGGG
CTTGTGGCATTGCCAACAAATTCCATCTATGCAGCAACTAAAGGTGCAATGAATCAACTTACAAGGAGTTTGGCTTACGAATGGGCTAAAGATAA
TATTCGAGTGAACGCAGTAGCACCTTGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543656] | SGN-U580171 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344531 [Download][View] | Facility Assigned ID: TUS65J09_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 14.5 |
Working
