EST details — SGN-E543656

Search information 
Request: 543656Match: SGN-E543656
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192427Clone name: TUS-65-J9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C92609 [cLEX-11-O1] Trace: SGN-T117032 EST: SGN-E304676 Direction: 5' Facility: TIGR
Clone: SGN-C192427 [TUS-65-J9] Trace: SGN-T344530 EST: SGN-E543655 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E543656Length: 790 bp (871 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E543656 [] (trimmed) GAGTTTTTTATGACCCCTTAGCACATTTTGTCACATATTTAACACAAAAACATGTTGCTTAATTCCTATTATTCAACTTAAGTTAGCAAGCAAGA
ACTATCAATGGCAGAAAAAAATGAATCCAATAATAGTGAAGATGGTAGGTGGACTCTTCAAGGGAAAACTGCCCTTGTTACTGGAGGCACTAAAG
GCATAGGGTAAATTTTCAATCTTTCTCAGACTCCAGTTATAGTATTGAATTTATTATTGTTATTGTATTGTTATTGTTTTGGTTAAAAATTAGGC
ATGCCATAGTAGAAGAATTAGCTGGATTTGGTGCTACAGTTTATACATGTTGTAGAAACCAAGAACAACTTGATGAGTGTTTAGAGAAATGGAGA
GGCAAAGGTTACAAAGTAGAAGGATGTGTATGTGATTTGACTTTGAGATCCCAAAGAGAGATGCTTATGGAGAAGGTTATCAATTTTTTCCAAGG
AAAACTCAACATTCTAATAAATAATGCAGGTATACTAATAGTTAAGCCAGCTACAGAGTTCACTGAGGATGATTACTCTATTCTTATGAAAACCA
ATTTTGAAGCTTCTCACCACATCTCCCAAATTGCACACCCAATTTTGAAGGCCTCAGAAAGTGGAAACATTGTCTTCATCTCTTCTATTGCTGGG
CTTGTGGCATTGCCAACAAATTCCATCTATGCAGCAACTAAAGGTGCAATGAATCAACTTACAAGGAGTTTGGCTTACGAATGGGCTAAAGATAA
TATTCGAGTGAACGCAGTAGCACCTTGGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543656] SGN-U580171 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344531 [Download][View] Facility Assigned ID: TUS65J09_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5