EST details — SGN-E543670
| Search information |
| Request: 543670 | Match: SGN-E543670 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192436 | Clone name: TUS-65-J18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92638 [cLEX-11-P23] | Trace: SGN-T116951 | EST: SGN-E304595 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192436 [TUS-65-J18] | Trace: SGN-T344546 | EST: SGN-E543671 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543670 | Length: 763 bp (918 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543670 [] (trimmed)
AAGAGTAAATTTAATATTGTACATGTATTCATTTCTGTTCGTAACACCACATAACCAAACTACATCTTATTCAATATATATAAACCCATCATCAA
CATTGAAGTGATCATAATGCAACAATCATATCTCTACGATGTTTGAAATAATCTAGCATTGCATTTCGATTTGGGATATTTTCTTTGATGATAGC
TACTTGTTTGAAATTGTAAATCCAAGATTGTAAATGAGGAAAATTGTTTGGTTCATAGACCTTTACTCCAGCAGCTTCTTGTATGACTTCTAGCC
AGAAAGCAAGCCACCCAAAAGCTATGTCAATTAAACCAATTGAATCCCCACTAAAAAACTTTTTATCTCCAAGACCTTGTTCCTCTATAATTTTT
AGGATTTTTTTGGCATTTTCAGTTGCCTTGACTTGCTCTTCTCCAATCTTGTGAAATATTTGATGAAATTCTGAGTTCTTATCTTCTCCGAACTT
GATCCAGAATCTAGCCTTAGCCTTTTCATAAGGATCCTTTGGGAACAAAGGATTTTGGGGCCATGTTTCTTCAATGTATTCAAGAATGATTGTTG
ATTCAACTATTGGTTTTTCATTATGTACAAGAATTGGGATCATCTTATAGATAGGGTTATATGTCAAAAGATGTTGGCTTTTGTTAGAAAGATCT
TCTTCTATGTATTCATAACTAATATTCTTGTGTTTCAAAGCCCAAATGATCCTATGACTAAAGGGACTTGGAAAAGCTCCAAACAATTTCACTTG
CTC
CATTGAAGTGATCATAATGCAACAATCATATCTCTACGATGTTTGAAATAATCTAGCATTGCATTTCGATTTGGGATATTTTCTTTGATGATAGC
TACTTGTTTGAAATTGTAAATCCAAGATTGTAAATGAGGAAAATTGTTTGGTTCATAGACCTTTACTCCAGCAGCTTCTTGTATGACTTCTAGCC
AGAAAGCAAGCCACCCAAAAGCTATGTCAATTAAACCAATTGAATCCCCACTAAAAAACTTTTTATCTCCAAGACCTTGTTCCTCTATAATTTTT
AGGATTTTTTTGGCATTTTCAGTTGCCTTGACTTGCTCTTCTCCAATCTTGTGAAATATTTGATGAAATTCTGAGTTCTTATCTTCTCCGAACTT
GATCCAGAATCTAGCCTTAGCCTTTTCATAAGGATCCTTTGGGAACAAAGGATTTTGGGGCCATGTTTCTTCAATGTATTCAAGAATGATTGTTG
ATTCAACTATTGGTTTTTCATTATGTACAAGAATTGGGATCATCTTATAGATAGGGTTATATGTCAAAAGATGTTGGCTTTTGTTAGAAAGATCT
TCTTCTATGTATTCATAACTAATATTCTTGTGTTTCAAAGCCCAAATGATCCTATGACTAAAGGGACTTGGAAAAGCTCCAAACAATTTCACTTG
CTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543670] | SGN-U567445 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344545 [Download][View] | Facility Assigned ID: TUS65J18_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.933 | Expected Error Rate: 0.0019 | Quality Trim Threshold: 12.5 |
Working
