EST details — SGN-E543753
| Search information |
| Request: 543753 | Match: SGN-E543753 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192484 | Clone name: TUS-65-L18 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92896 [cLEX-13-B16] | Trace: SGN-T117491 | EST: SGN-E306398 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192484 [TUS-65-L18] | Trace: SGN-T344629 | EST: SGN-E543754 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543753 | Length: 732 bp (928 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543753 [] (trimmed)
GAAAATAATTAAGATAGATAATGCAAGTGTTTTTCCTGAGTAGTTTAACTATGTTTATATACAAAAATTGACCAAGATATAGAGCCTACATAGGC
ACAAGCTCGGGGCACAAATTAATACTGTAGGAGACAGTAAACTGGGAGTGAGCGGAAATGATTCAAAAGAATATACATACTAAAATATTCCTGTA
TACAACTCTTCATCTCCCTCTAGGTTTCTGTTCATCACCACCTGCACCGTCTTTAGTAGCTAGTTGAAGTCTATTGGTTCCGGCTGAACGCGGAT
TTAGAGGATCTTTTTCCTGGACTAGTCGAGGTTCTGAACGGAAAGGAAATTCATCAGCCTCTAGCATATGTACTATTTGACCCATCTTTGGCCGC
TTGTTGGCATCCATATCTATGCAGCGAAGGCAGACCAACAAAACCCGCTTTAGGGATCTAGGAGGAGGATGGACTTCAATTAATGGGTCGACCAA
TTCTTCACCACGTCGATTTGATACCATTCCTTTAAACCAATCGACCAAGTTCATCTCCCCAGGCGGTCTCGAATAGTCAACAGGACTTCTTCCTG
TAATTATCTCCATGAGCATAACACCAAAGCTATACACGTCGCTCCCCTCATTAAGCATACCAGTGCTGGCATAGTCAGGAGAAACATATCCAAAA
GTTCCCATAACACGGGTAGTCACATAGCTTTTCTCAGGTCCTAGCAGCTTGGGCAGTCCAAAATCTG
ACAAGCTCGGGGCACAAATTAATACTGTAGGAGACAGTAAACTGGGAGTGAGCGGAAATGATTCAAAAGAATATACATACTAAAATATTCCTGTA
TACAACTCTTCATCTCCCTCTAGGTTTCTGTTCATCACCACCTGCACCGTCTTTAGTAGCTAGTTGAAGTCTATTGGTTCCGGCTGAACGCGGAT
TTAGAGGATCTTTTTCCTGGACTAGTCGAGGTTCTGAACGGAAAGGAAATTCATCAGCCTCTAGCATATGTACTATTTGACCCATCTTTGGCCGC
TTGTTGGCATCCATATCTATGCAGCGAAGGCAGACCAACAAAACCCGCTTTAGGGATCTAGGAGGAGGATGGACTTCAATTAATGGGTCGACCAA
TTCTTCACCACGTCGATTTGATACCATTCCTTTAAACCAATCGACCAAGTTCATCTCCCCAGGCGGTCTCGAATAGTCAACAGGACTTCTTCCTG
TAATTATCTCCATGAGCATAACACCAAAGCTATACACGTCGCTCCCCTCATTAAGCATACCAGTGCTGGCATAGTCAGGAGAAACATATCCAAAA
GTTCCCATAACACGGGTAGTCACATAGCTTTTCTCAGGTCCTAGCAGCTTGGGCAGTCCAAAATCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543753] | SGN-U581569 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344628 [Download][View] | Facility Assigned ID: TUS65L18_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
