EST details — SGN-E543845

Search information 
Request: 543845Match: SGN-E543845
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192537Clone name: TUS-65-N23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93216 [cLEX-14-A23] Trace: SGN-T118015 EST: SGN-E305529 Direction: 5' Facility: TIGR
Clone: SGN-C192537 [TUS-65-N23] Trace: SGN-T344719 EST: SGN-E543844 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E543845Length: 707 bp (900 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E543845 [] (trimmed) GTGTATTTCTTACTATTCCCTTCAACATTTTCCTCTATTTGAAGAGCTACTTACTTTCCATACACTTAGTTCAGATCTCGAGATGATGAAAGTAG
TGCTGAAGTTGGAGTATGTGGATGAAAAAGTCAAGCAAAAGGTGATGAAAAAAGTTTCTGTTGTGGAAGGTACGTTTTATTGTTCAAAATTATGT
CAGAATTCCAGATCTTGCAATAGATTTATTTTTTGTTGTTTCTGATGATGTTGCAGGGGTAGAGTCAATGTCGATGGATACAAAGGACAAGAAAT
TGACAGTAGTCGGAAATGTAGATCCAGTTGTAATAGTTTCAAAATTGAAGAAACTGTGTCACACTGAGATAGTATTGGTTGGACCAGCAAAAGAG
CCGGAGAAGAAGAAAGATAATGAGCCGAAGAAAACAGAAGACAAAAAGAAAGCGGCAGCGATAAAGGCATATCCAGCTCCAGTTCTCTATCAATA
TCAATATCAACAACCTTATCCACAGTACCCAACCCCTGTTCCTGCTTATCAGCACTATTACAGTGTGGAAGAGGACTCTAACTCTTGTGTGATCT
GCTAGCTTCACATTTGTGATGAGTTAGTGGACTAGTTCATACAAGCCTCCTTGTTGTACTATATTTGGTTGAAGAATTGAAATTTAAAGAGGATA
ATAAGCATTTGAAGCTGAAAAAAATAAAAAGTTAGATTTCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543845] SGN-U572794 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344720 [Download][View] Facility Assigned ID: TUS65N23_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0015 Quality Trim Threshold: 12.5