EST details — SGN-E543886
| Search information |
| Request: 543886 | Match: SGN-E543886 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192561 | Clone name: TUS-65-O23 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C93399 [cLEX-14-J19] | Trace: SGN-T118122 | EST: SGN-E305636 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192561 [TUS-65-O23] | Trace: SGN-T344760 | EST: SGN-E543885 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E543886 | Length: 764 bp (895 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E543886 [] (trimmed)
GAAAAACTGTGTCATCAAAAAAAACTACTTTTTTTTTTGCCCCTTTTCTTCTTTGTAATTGACCATCAAGATCCAGCAGTTGATATCCGCAACTG
GGTTCCTTACATTTTGCTTCTCAACTCGGGAGAAATCGTATTTGTTCTTGCAATGGATTTTTCGGGGTTGCAAACTAGTTTATAGAGATCTTAAA
TGTTTCAATCAACTACTTAATTAGGACCTTCGATTGTTGCGGTTATGACGGTGCCTCTCACCAAGATGGCTTTGGATAAGAGAGCTCTTACTACC
TTTGCTGCTATTTTGATTTACTTGGTCTTGAGCTGTGCTGTTTGCTCTGCTGTTCAAAGCGACATTGACTGTCTGAAATCTATTAAAGATTCATT
TGAAGATCCATTGAATTTCTTGAACACTACATGGAAGTTCGATAATCAGACCGAAGGTTTCATCTGCAAGTTTGCTGGGATTCAGTGCTGGCATC
CTGATGAAACCAGAGTTTTGAGTATCAGTCTTCCTGACATGCGTCTCAAGGGCAAGTTTCCACGTGGTCTTAAGAATTGCACCTCTATTACATCA
TTAGATCTTTCGAGCAACGAGCTCCATGGAAGTATTCCAAATGATATCTCCAAAATTATAGGTTTTTGTGGTAATGCTGGATCTCTCATCCAAAC
ATTTTTCAGGGGAAATCCCAGTTAATCTTGCAAACTGCTCTTTTTTAATAGCCTTAGACTTGACGACAACCAGTTTACGGGCCCNATTCCTGCAG
AAAT
GGTTCCTTACATTTTGCTTCTCAACTCGGGAGAAATCGTATTTGTTCTTGCAATGGATTTTTCGGGGTTGCAAACTAGTTTATAGAGATCTTAAA
TGTTTCAATCAACTACTTAATTAGGACCTTCGATTGTTGCGGTTATGACGGTGCCTCTCACCAAGATGGCTTTGGATAAGAGAGCTCTTACTACC
TTTGCTGCTATTTTGATTTACTTGGTCTTGAGCTGTGCTGTTTGCTCTGCTGTTCAAAGCGACATTGACTGTCTGAAATCTATTAAAGATTCATT
TGAAGATCCATTGAATTTCTTGAACACTACATGGAAGTTCGATAATCAGACCGAAGGTTTCATCTGCAAGTTTGCTGGGATTCAGTGCTGGCATC
CTGATGAAACCAGAGTTTTGAGTATCAGTCTTCCTGACATGCGTCTCAAGGGCAAGTTTCCACGTGGTCTTAAGAATTGCACCTCTATTACATCA
TTAGATCTTTCGAGCAACGAGCTCCATGGAAGTATTCCAAATGATATCTCCAAAATTATAGGTTTTTGTGGTAATGCTGGATCTCTCATCCAAAC
ATTTTTCAGGGGAAATCCCAGTTAATCTTGCAAACTGCTCTTTTTTAATAGCCTTAGACTTGACGACAACCAGTTTACGGGCCCNATTCCTGCAG
AAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E543886] | SGN-U580725 | Tomato 200607 | Build 2 | 28 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T344761 [Download][View] | Facility Assigned ID: TUS65O23_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |
Working
