EST details — SGN-E543962
Search information |
Request: 543962 | Match: SGN-E543962 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C192606 | Clone name: TUS-66-A20 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C93732 [cLEX-15-I9] | Trace: SGN-T117880 | EST: SGN-E305394 | Direction: 5' | Facility: TIGR |
Clone: SGN-C192606 [TUS-66-A20] | Trace: SGN-T344838 | EST: SGN-E543963 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E543962 | Length: 718 bp (878 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E543962 [] (trimmed)
CCGACTTTGCATTTTATAATTACTGTGAAGATAAGACTACATTCTTCAAGCAGTAAATGTGAAGAGACCAAAAATACTGACTAACATCACAGTCT
GTAGAAATCTCTTCACCATTAAAAATACAGAAAAAGAAGCACAAATTACATAGTTGGGTAGCTATGAATAAGGGACTTACACAGTAGAAATAGAA
TGACCTATATAGATAGTGAACCGTGGTATTTGTACAGGATAGAAAATGATCTAGTAATTATTGTATCTTACTCAACCATTATCGAAGGACCTCGT
TTACTTATTGAGCAACAATGAGCTCGTCCATTTGGAATCCGCTATCACTCTCAGGCATCATAATGTCATCATCAGTTGTGAAATGATACCGCTCT
CCAATGGCTCTCAGAAGCTGGTACAGTTCAAACATTGTTGGCCTCTCCTTAGGAGCAGCAGACAACACACATCGACAAGCAACTTTAAGGACCTG
GAAGATCTCACTGTCATAACCTTTACTACACAGAGAATGGTCAATCGCATCTTGAAGCTTAGATTCTCCAGAGAGTTGTGTGATCCATTCCACCA
AATTCCCCTTAGAGGTCTCGGGAGCTTTGGCAACAGAAGTTGGAGTCTCACCTGTCACTAACTCGAGAAGTACAACACCAAAACTGTACACATCA
CCTATTTGGTGTAACCATGAAAGTTCGCGCATACTCAGGTGCGACATAACCAA
GTAGAAATCTCTTCACCATTAAAAATACAGAAAAAGAAGCACAAATTACATAGTTGGGTAGCTATGAATAAGGGACTTACACAGTAGAAATAGAA
TGACCTATATAGATAGTGAACCGTGGTATTTGTACAGGATAGAAAATGATCTAGTAATTATTGTATCTTACTCAACCATTATCGAAGGACCTCGT
TTACTTATTGAGCAACAATGAGCTCGTCCATTTGGAATCCGCTATCACTCTCAGGCATCATAATGTCATCATCAGTTGTGAAATGATACCGCTCT
CCAATGGCTCTCAGAAGCTGGTACAGTTCAAACATTGTTGGCCTCTCCTTAGGAGCAGCAGACAACACACATCGACAAGCAACTTTAAGGACCTG
GAAGATCTCACTGTCATAACCTTTACTACACAGAGAATGGTCAATCGCATCTTGAAGCTTAGATTCTCCAGAGAGTTGTGTGATCCATTCCACCA
AATTCCCCTTAGAGGTCTCGGGAGCTTTGGCAACAGAAGTTGGAGTCTCACCTGTCACTAACTCGAGAAGTACAACACCAAAACTGTACACATCA
CCTATTTGGTGTAACCATGAAAGTTCGCGCATACTCAGGTGCGACATAACCAA
Unigenes |
Current Unigene builds | |||||
[SGN-E543962] | SGN-U580725 | Tomato 200607 | Build 2 | 28 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T344837 [Download][View] | Facility Assigned ID: TUS66A20_P1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.969 | Expected Error Rate: 0.0207 | Quality Trim Threshold: 14.5 |