EST details — SGN-E543962

Search information 
Request: 543962Match: SGN-E543962
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192606Clone name: TUS-66-A20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93732 [cLEX-15-I9] Trace: SGN-T117880 EST: SGN-E305394 Direction: 5' Facility: TIGR
Clone: SGN-C192606 [TUS-66-A20] Trace: SGN-T344838 EST: SGN-E543963 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E543962Length: 718 bp (878 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E543962 [] (trimmed) CCGACTTTGCATTTTATAATTACTGTGAAGATAAGACTACATTCTTCAAGCAGTAAATGTGAAGAGACCAAAAATACTGACTAACATCACAGTCT
GTAGAAATCTCTTCACCATTAAAAATACAGAAAAAGAAGCACAAATTACATAGTTGGGTAGCTATGAATAAGGGACTTACACAGTAGAAATAGAA
TGACCTATATAGATAGTGAACCGTGGTATTTGTACAGGATAGAAAATGATCTAGTAATTATTGTATCTTACTCAACCATTATCGAAGGACCTCGT
TTACTTATTGAGCAACAATGAGCTCGTCCATTTGGAATCCGCTATCACTCTCAGGCATCATAATGTCATCATCAGTTGTGAAATGATACCGCTCT
CCAATGGCTCTCAGAAGCTGGTACAGTTCAAACATTGTTGGCCTCTCCTTAGGAGCAGCAGACAACACACATCGACAAGCAACTTTAAGGACCTG
GAAGATCTCACTGTCATAACCTTTACTACACAGAGAATGGTCAATCGCATCTTGAAGCTTAGATTCTCCAGAGAGTTGTGTGATCCATTCCACCA
AATTCCCCTTAGAGGTCTCGGGAGCTTTGGCAACAGAAGTTGGAGTCTCACCTGTCACTAACTCGAGAAGTACAACACCAAAACTGTACACATCA
CCTATTTGGTGTAACCATGAAAGTTCGCGCATACTCAGGTGCGACATAACCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543962] SGN-U580725 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344837 [Download][View] Facility Assigned ID: TUS66A20_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0207 Quality Trim Threshold: 14.5